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ascl_list1.py
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#! /usr/bin/env python
#
# Parser for code.nasa.gov json file
#
# nov 2018: 1008 code entries (68 have NONE identifier), 229 unique tags,
# 454 catalog entries
# sep 2019: 541/532 codes (312 have NONE)
#
# Example use:
# ./ascl_list1.py -h List help
# ./ascl_list1.py lists all "ID" and "NAME" pairs for mode=1 (code.json)
# ./ascl_list1.py --mode 2 lists all "NAME" for mode=2 (data/catalog.json)
#
#
#
#
# The json looks roughly as follows:
#
import json
import sys
import argparse
import hashlib
# parses arguments for directories, mode, and match ID
parser = argparse.ArgumentParser()
parser.add_argument('--list', action='store_true')
parser.add_argument('--tags', action='store_true')
parser.add_argument('--codedir', type = str, default = '../code-nasa-gov', help = "input directory for code-nasa-gov")
parser.add_argument('--code', type = str, default = 'code.json', help = "input json for --mode 1")
parser.add_argument('--catalog', type = str, default = 'data/catalog.json', help = "input json for --mode 2")
parser.add_argument("--mode", type = int, default = 2, help = "1 (code) 2 (data/catalog)")
parser.add_argument("--matchid", type = str, default = None, help = "print json for exact match ID (mode 1 only)")
parser.add_argument("--matchname", type = str, default = None, help = "print json for matching NAME")
parser.add_argument("--matchdesc", type = str, default = None, help = "print json for matching DESCRIPTION")
parser.add_argument("--matchfield", type = str, default = None, help = "print the matching fields for both databases")
args = parser.parse_args()
mode = args.mode
match_name = args.matchname
match_desc = args.matchdesc
match_id = args.matchid
match_field = args.matchfield
# d1: dict_keys(['version', 'agency', 'measurementType', 'releases']) where d1['releases'] is a list of dict:
# ['repositoryURL','name','tags','contact','laborHours','date','organization','permissions','identifier','description']
# d2: a list of dict
# ['Update_Date','Public Code Repo','Description','License','NASA Center','External Link','Contributors','Labor_Hours','Software','Categories','Categories_NLP']
# code.json fields catalog.json fields
# 'repositoryURL' 'Public Code Repo',
# 'name' 'Software',
# 'tags' 'Categories','Categories_NLP'
# 'contact' 'Contributors',
# 'laborHours' 'Labor_Hours',
# 'date', 'Update_Date',
# 'organization' 'NASA Center',
# 'permissions' 'License',
# 'identifier' seems unique, but only appears for < half of codes
# 'description' 'Description',
#
if args.list:
if mode == 2:
f1 = open(args.codedir + '/' + args.catalog)
d1 = json.load(f1)
output_str = "Ordinal,Hash,Status,Software,Description,Public Code Repo,External Link,Contributors"
print( output_str )
for i in range(len(d1)):
ri = d1[i]
s = ", "
s2 = ","
soft = "\"" + ri['Software'] + "\""
desc = "\"" + ri['Description'].replace('"', "'") + "\""
pcr = "\"" + ri["Public Code Repo"] + "\""
el = "\"" + ri["External Link"] + "\""
cont = "\"" + s.join(ri["Contributors"]) + "\""
output_str = s2.join([str(i), str(0), soft, desc, pcr, el, cont])
print(output_str.encode("utf8"))
elif mode == 1:
f1 = open(args.codedir + '/' + args.code)
d1 = json.load(f1)
output_str = "Ordinal,Hash,Status,Software,Description,Public Code Repo,External Link,Contributors"
print( output_str )
r = d1["releases"]
for i in range(len(r)):
m = hashlib.md5()
ri = r[i]
s = ", "
s2 = ","
el = ("\"" + ri.get("homepageURL") + "\"") if ri.get("homepageURL") != None else ("\"" + "None" + "\"")
soft = "\"" + ri['name'] + "\""
desc = "\"" + ri['description'].replace('"', "'") + "\""
pcr = "\"" + ri["repositoryURL"] + "\""
cont = "\"" + ri["contact"].get("email") + "\""
m = hashlib.md5(bytes((el+soft+desc+pcr+cont).encode("utf8"))).hexdigest()
output_str = s2.join([str(i), m, str(0), soft, desc, pcr, el, cont])
print(output_str.encode("utf8"))
#if mode is 1 and match id is supplied, this will print the json
#dumps of the matching identifier
#Otherwise, will print the identifier and name
elif mode == 1:
f1 = open(args.codedir + '/' + args.code)
d1 = json.load(f1)
r = d1['releases']
#prints all the tags sequentially
if args.tags:
for i in range(len(r)):
ri = r[i]
tags= ri['tags']
for t in tags:
print(t)
else:
#if match_name is provided, then print json dump of the name
if match_name != None:
for i in range(len(r)):
ri = r[i]
name = ri['name']
if name.find(match_name) >= 0:
jstr = json.dumps(ri,indent=4)
print(jstr)
#same for description
elif match_desc != None:
for i in range(len(r)):
ri = r[i]
desc = ri['description']
if desc.find(match_desc) >= 0:
jstr = json.dumps(ri,indent=4)
print(jstr)
#same for id
elif match_id != None:
for i in range(len(r)):
ri = r[i]
iden = ri['identifier'] if 'identifier' in ri.keys() else "NONE"
if match_id == iden:
jstr = json.dumps(ri,indent=4)
print(jstr)
#otherwise print out "<identifier> <name>"
else:
for i in range(len(r)):
ri = r[i]
iden = ri['identifier'] if 'identifier' in ri.keys() else "NONE"
name = ri['name']
print("%s %s" % (iden,name))
elif mode == 2:
f2 = open(args.codedir + '/' + args.catalog, )
d2 = json.load(f2)
#prints out all the tags sequentially
if args.tags:
for i in range(len(d2)):
ri = d2[i]
cat = ri['Categories']
for c in cat:
print(c)
else:
#if match name is provided, print out all the dumps for matching names
if match_name != None:
for i in range(len(d2)):
ri = d2[i]
soft = ri['Software']
if soft.find(match_name) >= 0:
jstr = json.dumps(ri,indent=4)
print(jstr)
#same for description
elif match_desc != None:
for i in range(len(d2)):
ri = d2[i]
desc = ri['Description']
if desc.find(match_desc) >= 0:
jstr = json.dumps(ri,indent=4)
print(jstr)
#prints out name of the code
else:
for i in range(len(d2)):
ri = d2[i]
print("%s" % (ri['Software']))
elif mode == 3:
#MUST supply matchfield and matchname
#match_name is an exact match with both databases
#comparison mode
# code.json fields catalog.json fields Our field
# 'repositoryURL' 'Public Code Repo', repo
# 'name' 'Software', name
# 'tags' 'Categories','Categories_NLP' tags -both
# 'contact' 'Contributors', who -both
# 'laborHours' 'Labor_Hours', labor
# 'date', 'Update_Date', date -code.json
# 'organization' 'NASA Center', org
# 'permissions' 'License', lic -both
# 'identifier' --------------- id
# 'description' 'Description', desc
# 'homepageURL' 'External Link' ext
fields = {
"repo": ["repositoryURL", "Public Code Repo"],
"name": ["name", "Software"],
"tags": ["tags", "Categories"],
"who": ["contact", "Contributors"],
"labor":["laborHours", "Labor_Hours"],
"date": ["date", "Update_Date"],
"org": ["organization", "NASA Center"],
"lic": ["permissions", "License"],
"id": ["identifier", ""],
"desc": ["description", "Description"],
"ext": ["homepageURL", "External Link"]
}
if match_field and match_name:
f1 = open(args.codedir + '/' + args.code)
d1 = json.load(f1)
f2 = open(args.codedir + '/' + args.catalog, )
d2 = json.load(f2)
r = d1["releases"]
code_ans = "name not in code"
catalog_ans = "name not in catalog"
#iterates through code.json data structure and finds the first exact
#matching name. Sets the result equal to the appropriate field of the
#returned object
for i in range(len(r)):
ri = r[i]
if match_name == ri["name"]:
code_ans = str(ri[fields[match_field][0]])
#DOES NOT DISPLAY PROPERLY IF THE match_field IS tags, date, who, lic
#BREAKS IF match_field is id
'''
if match_field == "tags":
code_ans = ""
for tag in ri["tags"]:
code_ans += tag
'''
break
for j in range(len(d2)):
d2j = d2[j]
if match_name == d2j["Software"]:
catalog_ans = str(d2j[fields[match_field][1]])
break
print("code.json:\t" + code_ans + "\n" + "catalog.json:\t" + catalog_ans)
else:
print("missing matchfield and/or exact matchname")
else:
sys.exit(1)