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Don't fail if transgene finds 0 actionable mutations #214

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arkal opened this issue Jun 24, 2017 · 0 comments
Open

Don't fail if transgene finds 0 actionable mutations #214

arkal opened this issue Jun 24, 2017 · 0 comments
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arkal commented Jun 24, 2017

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davidstew pushed a commit that referenced this issue May 20, 2018
Transgene now returns None with an empty VCF and does not fail.
17e489b 
If Transgene returns None, all subsequent tools which rely on Transgene’s
return value return None as well.

Resolves #214
@ghost ghost assigned davidstew May 20, 2018
@ghost ghost added the in progress label May 20, 2018
@davidstew davidstew mentioned this issue May 21, 2018
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davidstew pushed a commit that referenced this issue May 26, 2018
Handle cases with no actionable mutations (resolves #214)
9726a95 
resolves #214

ProTECT now fails gracefully if Transgene receives an empty file,
 Transgene finds no actionable mutations, or merge_mhc_peptide_calls
produces no peptides. This is done by propagating a None value.
drkthomp pushed a commit to drkthomp/protect that referenced this issue Jan 13, 2021
@drkthomp
Handle cases with no actionable mutations (resolves BD2KGenomics#214)
ffc911b 
resolves BD2KGenomics#214

ProTECT now fails gracefully if Transgene receives an empty file,
 Transgene finds no actionable mutations, or merge_mhc_peptide_calls
produces no peptides. This is done by propagating a None value.
drkthomp pushed a commit to drkthomp/protect that referenced this issue Jan 13, 2021
@drkthomp
Handle cases with no actionable mutations (resolves BD2KGenomics#214)
42ebdac 
resolves BD2KGenomics#214

ProTECT now fails gracefully if Transgene receives an empty file,
 Transgene finds no actionable mutations, or merge_mhc_peptide_calls
produces no peptides. This is done by propagating a None value.
drkthomp added a commit to drkthomp/protect that referenced this issue Jan 13, 2021
@drkthomp
Revert "Handle cases with no actionable mutations (resolves BD2KGenom…
525ae7d 
…ics#214)"

This reverts commit 42ebdac.
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