NAMESPACE

# Generated by roxygen2: do not edit by hand

export(adjacencyMatrix)
export(formatGenes)
export(generateSequences)
export(geometricEncoder)
export(getIMGT)
export(getIR)
export(inferCDR)
export(mutateSequences)
export(onehotEncoder)
export(positionalEncoder)
export(probabilityMatrix)
export(propertyEncoder)
export(sequenceDecoder)
export(tokenizeSequences)
export(variationalSequences)
importFrom(SingleCellExperiment,colData)
importFrom(hash,hash)
importFrom(httr,GET)
importFrom(httr,content)
importFrom(httr,user_agent)
importFrom(keras3,callback_early_stopping)
importFrom(keras3,compile)
importFrom(keras3,fit)
importFrom(keras3,keras_model)
importFrom(keras3,layer_dense)
importFrom(keras3,layer_input)
importFrom(keras3,layer_lambda)
importFrom(keras3,layer_normalization)
importFrom(keras3,loss_binary_crossentropy)
importFrom(keras3,optimizer_adadelta)
importFrom(keras3,optimizer_adagrad)
importFrom(keras3,optimizer_adam)
importFrom(keras3,optimizer_adamax)
importFrom(keras3,optimizer_ftrl)
importFrom(keras3,optimizer_nadam)
importFrom(keras3,optimizer_rmsprop)
importFrom(keras3,optimizer_sgd)
importFrom(magrittr,"%>%")
importFrom(matrixStats,colMads)
importFrom(matrixStats,colMeans2)
importFrom(matrixStats,colMedians)
importFrom(matrixStats,colSums2)
importFrom(matrixStats,colVars)
importFrom(matrixStats,colWeightedMeans)
importFrom(methods,slot)
importFrom(reticulate,array_reshape)
importFrom(rvest,html_nodes)
importFrom(rvest,html_text)
importFrom(rvest,read_html)
importFrom(stats,median)
importFrom(stats,predict)
importFrom(stats,runif)
importFrom(stats,setNames)
importFrom(stringi,stri_rand_strings)
importFrom(stringr,str_extract)
importFrom(stringr,str_remove_all)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_sort)
importFrom(stringr,str_split)
importFrom(tensorflow,tf)
importFrom(utils,data)