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Build a stripped down version of the sampler/solver to see what is reducing our performance if anything #231

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arik-shurygin opened this issue Aug 19, 2024 · 3 comments
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experiment some sort of experiment to better understand a part of the model

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@arik-shurygin
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build a really stripped down version of our infrastructure. No classes, just the sampler, parameters, and ODEs / diffrax solve. To see if there are dramatic improvements to the performance of fitting.

If so, slowly add back onto the model until we understand what exactly is slowing it down and how to best avoid it.

@arik-shurygin arik-shurygin changed the title Build a stripped down version of the sampler/solver to see what is reducing our performance Build a stripped down version of the sampler/solver to see what is reducing our performance if anything Aug 19, 2024
@SamuelBrand1
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Do you have any benchmarks? When did performance degrade, or is this a general idea for performance improvement?

@arik-shurygin
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Do you have any benchmarks? When did performance degrade, or is this a general idea for performance improvement?

General idea, this was sidetracked by the fall virus response + SMH meeting. Will likely get started soon

@arik-shurygin
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being explored on the gpu optim branch here: https://github.com/CDCgov/DynODE/tree/gpu-optim

@arik-shurygin arik-shurygin added the experiment some sort of experiment to better understand a part of the model label Oct 17, 2024
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