diff --git a/environment_tf.yml b/environment_tf.yml new file mode 100644 index 0000000..4a9ed93 --- /dev/null +++ b/environment_tf.yml @@ -0,0 +1,117 @@ +# for extracting features with vggish, all other actions run in environment_torch.yml +name: vggish-env +channels: + - conda-forge + - defaults +dependencies: + - _libgcc_mutex=0.1=main + - _openmp_mutex=5.1=1_gnu + - asttokens=2.2.1=pyhd8ed1ab_0 + - backcall=0.2.0=pyh9f0ad1d_0 + - backports=1.0=pyhd8ed1ab_3 + - backports.functools_lru_cache=1.6.5=pyhd8ed1ab_0 + - bzip2=1.0.8=h7b6447c_0 + - ca-certificates=2023.7.22=hbcca054_0 + - comm=0.1.4=pyhd8ed1ab_0 + - debugpy=1.6.7=py310h6a678d5_0 + - decorator=5.1.1=pyhd8ed1ab_0 + - entrypoints=0.4=pyhd8ed1ab_0 + - executing=1.2.0=pyhd8ed1ab_0 + - ipykernel=6.25.1=pyh71e2992_0 + - ipython=8.14.0=pyh41d4057_0 + - jedi=0.19.0=pyhd8ed1ab_0 + - jupyter_client=7.3.4=pyhd8ed1ab_0 + - jupyter_core=5.3.1=py310hff52083_0 + - ld_impl_linux-64=2.38=h1181459_1 + - libffi=3.4.4=h6a678d5_0 + - libgcc-ng=11.2.0=h1234567_1 + - libgomp=11.2.0=h1234567_1 + - libsodium=1.0.18=h36c2ea0_1 + - libstdcxx-ng=11.2.0=h1234567_1 + - libuuid=1.41.5=h5eee18b_0 + - matplotlib-inline=0.1.6=pyhd8ed1ab_0 + - ncurses=6.4=h6a678d5_0 + - nest-asyncio=1.5.6=pyhd8ed1ab_0 + - openssl=3.0.10=h7f8727e_2 + - packaging=23.1=pyhd8ed1ab_0 + - parso=0.8.3=pyhd8ed1ab_0 + - pexpect=4.8.0=pyh1a96a4e_2 + - pickleshare=0.7.5=py_1003 + - pip=23.2.1=py310h06a4308_0 + - platformdirs=3.10.0=pyhd8ed1ab_0 + - prompt-toolkit=3.0.39=pyha770c72_0 + - prompt_toolkit=3.0.39=hd8ed1ab_0 + - psutil=5.9.0=py310h5eee18b_0 + - ptyprocess=0.7.0=pyhd3deb0d_0 + - pure_eval=0.2.2=pyhd8ed1ab_0 + - pygments=2.16.1=pyhd8ed1ab_0 + - python=3.10.12=h955ad1f_0 + - python-dateutil=2.8.2=pyhd8ed1ab_0 + - python_abi=3.10=2_cp310 + - pyzmq=25.1.0=py310h6a678d5_0 + - readline=8.2=h5eee18b_0 + - setuptools=68.0.0=py310h06a4308_0 + - six=1.16.0=pyh6c4a22f_0 + - sqlite=3.41.2=h5eee18b_0 + - stack_data=0.6.2=pyhd8ed1ab_0 + - tk=8.6.12=h1ccaba5_0 + - tornado=6.1=py310h5764c6d_3 + - traitlets=5.9.0=pyhd8ed1ab_0 + - typing-extensions=4.7.1=hd8ed1ab_0 + - typing_extensions=4.7.1=pyha770c72_0 + - tzdata=2023c=h04d1e81_0 + - wcwidth=0.2.6=pyhd8ed1ab_0 + - wheel=0.38.4=py310h06a4308_0 + - xz=5.4.2=h5eee18b_0 + - zeromq=4.3.4=h9c3ff4c_1 + - zlib=1.2.13=h5eee18b_0 + - pip: + - absl-py==1.4.0 + - astunparse==1.6.3 + - cachetools==5.3.1 + - certifi==2023.7.22 + - charset-normalizer==3.2.0 + - contourpy==1.1.0 + - cycler==0.11.0 + - flatbuffers==23.5.26 + - fonttools==4.42.1 + - gast==0.4.0 + - google-auth==2.22.0 + - google-auth-oauthlib==1.0.0 + - google-pasta==0.2.0 + - grpcio==1.57.0 + - h5py==3.9.0 + - idna==3.4 + - jax==0.4.14 + - keras==2.12.0 + - kiwisolver==1.4.5 + - libclang==16.0.6 + - markdown==3.4.4 + - markupsafe==2.1.3 + - matplotlib==3.7.1 + - ml-dtypes==0.2.0 + - numpy==1.23.5 + - oauthlib==3.2.2 + - opt-einsum==3.3.0 + - pandas==1.5.3 + - pillow==10.0.0 + - protobuf==4.24.2 + - pyasn1==0.5.0 + - pyasn1-modules==0.3.0 + - pyparsing==3.1.1 + - pytz==2023.3 + - requests==2.31.0 + - requests-oauthlib==1.3.1 + - rsa==4.9 + - scipy==1.10.1 + - tensorboard==2.12.3 + - tensorboard-data-server==0.7.1 + - tensorflow==2.12.0 + - tensorflow-estimator==2.12.0 + - tensorflow-hub==0.14.0 + - tensorflow-io-gcs-filesystem==0.33.0 + - termcolor==2.3.0 + - urllib3==1.26.16 + - werkzeug==2.3.7 + - wrapt==1.14.1 +prefix: /home/ben/miniconda3/envs/yamnet-env diff --git a/environment_torch.yml b/environment_torch.yml new file mode 100644 index 0000000..2929184 --- /dev/null +++ b/environment_torch.yml @@ -0,0 +1,265 @@ +name: simclr_pytorch_reefs +channels: + - pytorch + - defaults +dependencies: + - _libgcc_mutex=0.1=main + - _openmp_mutex=5.1=1_gnu + - appdirs=1.4.4=pyhd3eb1b0_0 + - asttokens=2.0.5=pyhd3eb1b0_0 + - backcall=0.2.0=pyhd3eb1b0_0 + - blas=1.0=mkl + - bottleneck=1.3.5=py38h7deecbd_0 + - brotlipy=0.7.0=py38h27cfd23_1003 + - bzip2=1.0.8=h7b6447c_0 + - ca-certificates=2023.05.30=h06a4308_0 + - certifi=2023.7.22=py38h06a4308_0 + - cffi=1.15.1=py38h5eee18b_3 + - charset-normalizer=2.0.4=pyhd3eb1b0_0 + - configargparse=1.4=pyhd3eb1b0_0 + - cryptography=41.0.2=py38h22a60cf_0 + - cudatoolkit=11.8.0=h6a678d5_0 + - dataclasses=0.8=pyh6d0b6a4_7 + - decorator=5.1.1=pyhd3eb1b0_0 + - executing=0.8.3=pyhd3eb1b0_0 + - ffmpeg=4.3=hf484d3e_0 + - filelock=3.9.0=py38h06a4308_0 + - freetype=2.12.1=h4a9f257_0 + - giflib=5.2.1=h5eee18b_3 + - gmp=6.2.1=h295c915_3 + - gmpy2=2.1.2=py38heeb90bb_0 + - gnutls=3.6.15=he1e5248_0 + - idna=3.4=py38h06a4308_0 + - intel-openmp=2023.1.0=hdb19cb5_46305 + - ipython=8.12.2=py38h06a4308_0 + - ipython_genutils=0.2.0=pyhd3eb1b0_1 + - jedi=0.18.1=py38h06a4308_1 + - joblib=1.2.0=py38h06a4308_0 + - jpeg=9e=h5eee18b_1 + - lame=3.100=h7b6447c_0 + - lcms2=2.12=h3be6417_0 + - ld_impl_linux-64=2.38=h1181459_1 + - lerc=3.0=h295c915_0 + - libdeflate=1.17=h5eee18b_0 + - libedit=3.1.20221030=h5eee18b_0 + - libffi=3.4.4=h6a678d5_0 + - libgcc-ng=11.2.0=h1234567_1 + - libgfortran-ng=11.2.0=h00389a5_1 + - libgfortran5=11.2.0=h1234567_1 + - libgomp=11.2.0=h1234567_1 + - libiconv=1.16=h7f8727e_2 + - libidn2=2.3.4=h5eee18b_0 + - libpng=1.6.39=h5eee18b_0 + - libstdcxx-ng=11.2.0=h1234567_1 + - libtasn1=4.19.0=h5eee18b_0 + - libtiff=4.5.0=h6a678d5_2 + - libunistring=0.9.10=h27cfd23_0 + - libuv=1.44.2=h5eee18b_0 + - libwebp=1.2.4=h11a3e52_1 + - libwebp-base=1.2.4=h5eee18b_1 + - lz4-c=1.9.4=h6a678d5_0 + - markupsafe=2.1.1=py38h7f8727e_0 + - matplotlib-inline=0.1.6=py38h06a4308_0 + - mkl=2023.1.0=h213fc3f_46343 + - mkl-service=2.4.0=py38h5eee18b_1 + - mkl_fft=1.3.6=py38h417a72b_1 + - mkl_random=1.2.2=py38h417a72b_1 + - mpc=1.1.0=h10f8cd9_1 + - mpfr=4.0.2=hb69a4c5_1 + - mpmath=1.3.0=py38h06a4308_0 + - ncurses=6.4=h6a678d5_0 + - nettle=3.7.3=hbbd107a_1 + - networkx=3.1=py38h06a4308_0 + - ninja=1.10.2=h06a4308_5 + - ninja-base=1.10.2=hd09550d_5 + - numexpr=2.8.4=py38hc78ab66_1 + - numpy=1.24.3=py38hf6e8229_1 + - numpy-base=1.24.3=py38h060ed82_1 + - olefile=0.46=pyhd3eb1b0_0 + - openh264=2.1.1=h4ff587b_0 + - openssl=3.0.10=h7f8727e_0 + - packaging=23.0=py38h06a4308_0 + - pandas=2.0.3=py38h1128e8f_0 + - parso=0.8.3=pyhd3eb1b0_0 + - pexpect=4.8.0=pyhd3eb1b0_3 + - pickleshare=0.7.5=pyhd3eb1b0_1003 + - pillow=9.4.0=py38h6a678d5_0 + - pip=23.2.1=py38h06a4308_0 + - pooch=1.4.0=pyhd3eb1b0_0 + - prompt-toolkit=3.0.36=py38h06a4308_0 + - ptyprocess=0.7.0=pyhd3eb1b0_2 + - pure_eval=0.2.2=pyhd3eb1b0_0 + - pycparser=2.21=pyhd3eb1b0_0 + - pygments=2.15.1=py38h06a4308_1 + - pyopenssl=23.2.0=py38h06a4308_0 + - pysocks=1.7.1=py38h06a4308_0 + - python=3.8.17=h955ad1f_0 + - python-dateutil=2.8.2=pyhd3eb1b0_0 + - python-tzdata=2023.3=pyhd3eb1b0_0 + - pytorch-mutex=1.0=cpu + - pytz=2022.7=py38h06a4308_0 + - pyyaml=6.0=py38h5eee18b_1 + - readline=8.2=h5eee18b_0 + - requests=2.31.0=py38h06a4308_0 + - scikit-learn=1.3.0=py38h1128e8f_0 + - scipy=1.10.1=py38hf6e8229_1 + - setuptools=68.0.0=py38h06a4308_0 + - six=1.16.0=pyhd3eb1b0_1 + - sqlite=3.41.2=h5eee18b_0 + - stack_data=0.2.0=pyhd3eb1b0_0 + - sympy=1.11.1=py38h06a4308_0 + - tabulate=0.8.10=py38h06a4308_0 + - tbb=2021.8.0=hdb19cb5_0 + - threadpoolctl=2.2.0=pyh0d69192_0 + - tk=8.6.12=h1ccaba5_0 + - torchaudio=2.0.2=py38_cpu + - torchvision=0.15.2=py38_cpu + - tqdm=4.65.0=py38hb070fc8_0 + - traitlets=5.7.1=py38h06a4308_0 + - typing_extensions=4.7.1=py38h06a4308_0 + - urllib3=1.26.16=py38h06a4308_0 + - wcwidth=0.2.5=pyhd3eb1b0_0 + - wheel=0.38.4=py38h06a4308_0 + - xz=5.4.2=h5eee18b_0 + - yaml=0.2.5=h7b6447c_0 + - zlib=1.2.13=h5eee18b_0 + - zstd=1.5.5=hc292b87_0 + - pip: + - anyio==3.7.1 + - argon2-cffi==23.1.0 + - argon2-cffi-bindings==21.2.0 + - aru-metadata-parser==0.1.0 + - attrs==23.1.0 + - audiomentations==0.32.0 + - audioread==3.0.0 + - babel==2.12.1 + - beautifulsoup4==4.12.2 + - bleach==6.0.0 + - bokeh==3.1.1 + - click==8.1.7 + - cloudpickle==2.2.1 + - cmake==3.27.2 + - colorcet==3.0.1 + - comm==0.1.4 + - contextlib2==21.6.0 + - contourpy==1.1.0 + - cycler==0.11.0 + - dask==2023.5.0 + - datashader==0.15.2 + - datashape==0.5.2 + - debugpy==1.6.7.post1 + - defusedxml==0.7.1 + - deprecated==1.2.14 + - diffdist==0.1 + - docker-pycreds==0.4.0 + - docopt==0.6.2 + - entrypoints==0.4 + - exceptiongroup==1.1.3 + - fastjsonschema==2.18.0 + - fonttools==4.42.1 + - fsspec==2023.6.0 + - gitdb==4.0.10 + - gitpython==3.1.32 + - grad-cam==1.4.8 + - holoviews==1.17.1 + - imageio==2.31.1 + - importlib-metadata==6.8.0 + - importlib-resources==6.0.1 + - install==1.3.5 + - ipykernel==6.25.1 + - jinja2==2.11.3 + - json5==0.9.14 + - jsonschema==4.19.0 + - jsonschema-specifications==2023.7.1 + - jupyter-client==7.4.9 + - jupyter-core==5.3.1 + - jupyter-server==1.24.0 + - jupyterlab==3.5.3 + - jupyterlab-pygments==0.2.2 + - jupyterlab-server==2.10.3 + - kiwisolver==1.4.4 + - lazy-loader==0.3 + - librosa==0.10.1 + - linkify-it-py==2.0.2 + - lit==16.0.6 + - llvmlite==0.40.1 + - locket==1.0.0 + - markdown==3.4.4 + - markdown-it-py==3.0.0 + - matplotlib==3.7.2 + - mdit-py-plugins==0.4.0 + - mdurl==0.1.2 + - mistune==0.8.4 + - msgpack==1.0.5 + - multipledispatch==1.0.0 + - nbclassic==1.0.0 + - nbclient==0.5.13 + - nbconvert==6.4.5 + - nbformat==5.9.2 + - nest-asyncio==1.5.7 + - notebook==6.5.5 + - notebook-shim==0.2.3 + - numba==0.57.1 + - nvidia-cublas-cu11==11.10.3.66 + - nvidia-cuda-cupti-cu11==11.7.101 + - nvidia-cuda-nvrtc-cu11==11.7.99 + - nvidia-cuda-runtime-cu11==11.7.99 + - nvidia-cudnn-cu11==8.5.0.96 + - nvidia-cufft-cu11==10.9.0.58 + - nvidia-curand-cu11==10.2.10.91 + - nvidia-cusolver-cu11==11.4.0.1 + - nvidia-cusparse-cu11==11.7.4.91 + - nvidia-nccl-cu11==2.14.3 + - nvidia-nvtx-cu11==11.7.91 + - opencv-python==4.8.0.76 + - opensoundscape==0.9.1 + - pandocfilters==1.5.0 + - panel==1.2.1 + - param==1.13.0 + - partd==1.4.0 + - pathtools==0.1.2 + - pkgutil-resolve-name==1.3.10 + - platformdirs==3.10.0 + - prometheus-client==0.17.1 + - protobuf==4.24.1 + - psutil==5.9.5 + - pyct==0.5.0 + - pynndescent==0.5.10 + - pyparsing==3.0.9 + - pyviz-comms==3.0.0 + - pywavelets==1.4.1 + - pyzmq==24.0.1 + - referencing==0.30.2 + - rpds-py==0.9.2 + - schema==0.7.5 + - scikit-image==0.21.0 + - seaborn==0.12.2 + - send2trash==1.8.2 + - sentry-sdk==1.29.2 + - setproctitle==1.3.2 + - sklearn==0.0.post7 + - smmap==5.0.0 + - sniffio==1.3.0 + - soundfile==0.12.1 + - soupsieve==2.4.1 + - soxr==0.3.6 + - strconv==0.4.2 + - terminado==0.17.1 + - testpath==0.6.0 + - tifffile==2023.7.10 + - tomli==2.0.1 + - toolz==0.12.0 + - torch==2.0.0 + - tornado==6.3.3 + - triton==2.0.0 + - ttach==0.0.3 + - uc-micro-py==1.0.2 + - umap-learn==0.5.3 + - wandb==0.13.11 + - webencodings==0.5.1 + - websocket-client==1.6.1 + - wrapt==1.15.0 + - xarray==2023.1.0 + - xyzservices==2023.7.0 + - zipp==3.16.2 +prefix: /home/ben/miniconda3/envs/simclr_pytorch_reefs