Skip to content

Pull requests: DerrickWood/kraken

New pull request New
12 Open 17 Closed
12 Open 17 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Update rsync_from_ncbi.pl
#145 opened Jul 22, 2020 by jrherr Loading…
support for undefined taxa and for percentages of seqlengths
#121 opened Apr 17, 2018 by lskatz Loading…
Install kraken to $PREFIX/libexec and symlink from $PREFIX/bin
#90 opened Oct 25, 2017 by yesimon Loading…
Add --db-index, --db-file, --taxonomy, --db-pipe for piped db files
#89 opened Oct 24, 2017 by yesimon Loading…
8
Make build db compatible for OS X
#58 opened Feb 23, 2017 by yesimon Loading…
1
Fixed human genome downloading and added auto-masking feature using dustmasker
#57 opened Feb 22, 2017 by taltman Loading…
6
modified scripts/download_genomic_library.sh
#54 opened Oct 12, 2016 by kemin711 Loading…
Compile when omp.h is absent
#31 opened Oct 4, 2015 by BenLangmead Loading…
Skip empty FASTA sequences, and allow to force taxids
#27 opened Jul 10, 2015 by fbreitwieser Loading…
Set default shrink block offset
#23 opened May 26, 2015 by andrewjpage Loading…
Print header with kraken version and database
#22 opened May 26, 2015 by andrewjpage Loading…
Add support for the mouse (GRCm38) library
#21 opened May 22, 2015 by andrewjpage Loading…
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.