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Is kraken2 suitable for tNGS data? #896

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zhuying412 opened this issue Dec 9, 2024 · 0 comments
Open

Is kraken2 suitable for tNGS data? #896

zhuying412 opened this issue Dec 9, 2024 · 0 comments

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@zhuying412
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I know that Kraken2 is commonly used for metagenomic data analysis and species classification. I wonder if it is suitable for tNGS (targeted Next-Generation Sequencing) data, such as data obtained from ultra-multiplex PCR capture or probe capture?
@zhuying412 zhuying412 changed the title can kraken2 be used to classify tNGS data? Is kraken2 suitable for tNGS data? Dec 9, 2024
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