23.07

Dependencies

AMReX: 23.07
PICSAR (development, incl. QED): 1903ecfff51a31a321d39790af90d8520c10537e
picmistandard: release 0.25.0
openPMD-api: release 0.15.1

List of PRs merged since the last release

This list was generated with

git log 23.06.. --format='- %s'

• Remove field probe raw_fields option (#4074)
• Release 23.07 (#4088)
• Clang-tidy CI test: add some performance checks in clang-tidy CI test (#4077)
• Update Adastra documentation (#4082)
• Update LUMI documentation (#4087)
• ablastr: fix missing/superfluous #include directives (#4080)
• Add reduced diag precision input parameter (#4079)
• Update Intel compiler installation (#4081)
• Clang-tidy CI test: make bugprone checks list more compact (#4075)
• Clang-tidy CI test: add almost all missing bugprone clang-tidy checks (#4064)
• Clang-tidy CI test: add more bugprone clang-tidy checks (#4047)
• Clang-tidy CI test: add few bugprone clang-tidy checks (#4046)
• main.cpp: change warpx_amrex_init into warpx::initialization::amrex_init (#4055)
• explicitly exclude bugprone-easily-swappable-parameters check from clang-tidy CI test (#4060)
• Update GitHub actions CI test to use Ascent 0.9.2 (#4067)
• Fix max_grid_size for RZ PSATD (#4073)
• Fix clang-tidy bugprone-branch-clone warning (#4072)
• Impose t_lab in Lorentz Transformation for externally loaded particles (#3996)
• Docs: Karolina (IT4I) (#4012)
• Allow FieldProbe in RZ geometry (#4057)
• Continuous injection of moving plasma (#3958)
• Use GPU compatible kernel in sumParticleCharge (#3949)
• Docs: update openPMD tutorials link (#4061)
• Allocate fewer rho components for ES, MS, hybrid-PIC solvers (#4036)
• RigidInjection: properly transform z_inject to boosted frame (#4059)
• Fix typo in docs of hybrid PIC scheme (#4058)
• Clean up of MultiFab tagging (#4014)
• Replace unsed WARPX_DIM_2D with AMREX_SPACEDIM==2 (#4039)
• AMReX: Weekly Update (#4053)
• remove dependency of VectorPoissonSolver.H on WarpX (#4054)
• Doc: Link All Tests in Examples (#4056)
• Kernel Fusion in Reduced Diagnostics for Fields (#4050)
• Define new InjectorFlux object, and use it in AddPlasmaFlux (#4040)
• Doc: Summit SciPy -j10 (#4045)
• Adding current density to Field Reduction reduced diagnostic (#3980)
• Clang-tidy CI test: add bugprone-branch-clone check (#4030)
• refactored HybridPICModel::HybridPICSolveE to more readable (#4044)
• Doc: Summit Scipy Install (#4023)
• Remove Custom momentum and density injector (#4037)
• Explicitly check field IndexType appropriateness when using hybrid-PIC solver (#4034)
• change default current deposition algorithm to direct with hybrid-PIC solver (#4033)
• added WarpX::HybridPICDepositInitialRhoAndJ() helper function to clean up WarpX::Evolve (#4032)
• abort simulation if a user attempts to use an external field applied directly to the particles with the hybrid-PIC solver (#4020)
• Doc: HPC Machines Source Py Env (#4029)
• Doc: HPC3 (UCI) HDF5 & GPU Visibility (#4021)
• Doc: IPAC22 Tan et al. Dielectric (#4027)
• Clean up GpuArray init in ABLASTR interp modules (#4028)
• Doc: IPAC23 Paper (#4017)
• add modernize-avoid-bind check to clang-tidy CI test (#4025)
• Move MPIInitHelpers into ablastr (#4026)
• For ReducedDiags, write header on restart if file does not exist (#4022)
• Fixes to remove compilation warnings (#4015)
• Doc: HPC QED & Multi-Dim (#4013)
• Doc: HPC3 (UCI) Fix Link
• Add documentation describing handling of PICMI input (#3978)
• AMReX: Weekly Update (#4008)
• Doc: Batch System Cheat Sheets (#4011)
• Doc: HPC3 at UCI (#4010)
• Doc: Copy Code Blocks (#4004)
• add performance-faster-string-find check in clang-tidy (#4003)
• Docs: Install Dep Scripts Build Dirs (#4002)
• add performance-for-range-copy check to clang-tidy CI test (#4000)
• add readability-non-const-parameter check to clang-tidy file (#3999)
• correct seperate --> separate (#3998)
• Summit: Optimas Only builds 1hr
• Summit: Install optimas separately
• Doc: Perlmutter (NERSC) Install Helpers (#3985)
• Doc: Summit (OLCF) Quick Install + Torch (#3997)
• Generalize buffers for SyncRho, SyncCurrent, and related functions (#3995)
• Add Twiss alpha to BeamRelevant and Docs (#3993)
• Added external field loading from file to picmi.py (#3945)
• AMReX: Weekly Update (#3992)
• Fix: Unused Cost GPUClock (#3988)
• Docs: Frontier Script Details
• Doc: Frontier (OLCF) hipcc (#3986)
• Fix: 1D Abort in Kernels (#3987)
• Docs: Update OpenMP for macOS Pkg Mgs (#3990)
• Docs: Debian/Ubuntu no-MPI (#3983)
• Add Frontier Checkpointing and IO Warning (#3984)
• Add python script to update benchmarks from Azure output (#2355)
• Enforce const correctness using clang-tidy CI test (#3921)
• Docs: TAE (#3977)
• Cleanup unused parts of WarpX Python interface (#3971)
• Ohm's law solver (hybrid kinetic-fluid extension) (#3665)
• Replace amrex::Abort with WARPX_ABORT_WITH_MESSAGE (#3965)
• precommit: make sure isort output is compatible with black (#3981)
• Fix SyncCurrent and SyncRho for multi-levels (#3777)
• geometry.is_periodic: Only Warn (#3974)
• Read RZ laser files produced by lasy (#3910)
• Make sbatch command consistent with the example file (#3972)
• Doc: rocFFT 5.4+ defaults to in-memory (#3968)
• [pre-commit.ci] pre-commit autoupdate (#3970)
• Use clang-tidy in CI (#3917)
• AMReX: Weekly Update (#3969)
• Add waterbag generation in injector (#3698)

23.06

Dependencies

AMReX: 23.06
PICSAR (development, incl. QED): 1903ecfff51a31a321d39790af90d8520c10537e
picmistandard: release 0.24.0
openPMD-api: release 0.15.1

List of PRs merged since the last release

This list was generated with

git log 23.05.. --format='- %s'

• Release 23.06 (#3962)
• Fix wrong executable and missing Werror flag in CI test (#3964)
• Add CI test in single precision (#3955)
• Histogram 2D (#3883)
• RZ PSATD: do_pml_div..._cleaning not implemented, fix default (#3940)
• Add max_background_density to MCCollision (#3960)
• revert #3928 calculation of b0 in binary collisions and add comment (#3961)
• Update PICMI version (#3959)
• Update picmi interface for MCCCollisions (#3953)
• Fix: PSATD+RZ in SP (#3956)
• make narrowing conversion explicit using static_cast (#3954)
• Work-Around: I/O w/ GCC 8.3 (#3943)
• AMReX: Weekly Update (#3951)
• Doc: Update Lassen (LLNL) (#3942)
• Fix: PSATD RZ Multi-Dim CUDA Build (#3947)
• Explicitly delete NamedComponentParticleContainer's copy constructor (#3944)
• Fix bug of txye binary file reader when used with MPI (#3941)
• Sort WarpX-tests.ini file (#3935)
• Update documentation to use WarpX on LUMI supercomputer (#3934)
• CI: No Draft CodeQL (#3937)
• Multi-Dim Buildsystem Support (#3933)
• AMReX/PICSAR: Weekly Update (#3936)
• CUDA: Recommend 11.3+ (#3932)
• Doc: Summit ADIOS 2.8.1 (#3931)
• Implement legacy mode for external laser file reading (#3923)
• Doc: ux,uy,uz momenta and improving docs (#3930)
• AMReX: Weekly Update (#3926)
• Fix calculation of b0 in binary collisions (#3928)
• Remove Harris laser (#3929)
• Bug fix - PEC - Remove duplicate boundary cell updates for rho and J (#3890)
• Doc: LASY 0.1.1 (#3920)
• CMake: Simplify Lib Symlink (#3925)
• Add a link to CMake documentation in the WarpX build section (#3924)
• Doc: ux,uy,uz Momenta (#3916)
• Moving window: check pointers to F,G when applying shift (#3897)
• Fix typo in Adastra cluster documentation (#3918)
• Docs: Conda Dev w/ Boost (#3911)
• Do not duplicate protected member of base class (#3915)
• Field Gather: Generalize FGcell (#3909)
• AMReX: Weekly Update (#3907)
• Cleanup: rocFFT Includes (#3908)
• Enable field ionization from PICMI (#3298)
• ROCm 5.2+ (#3906)
• remove unnecessary #include (#3891)
• make Poisson Solver in ablastr depend only on ablastr (and AMReX) (#3892)
• fix PoyntingVec calc (#3905)
• Implement reading of laser files produced by lasy (#3871)
• More Managed Memory Fixes: Diagnostics (#3899)
• Prevent implicit capture on GPU for RZ sims (#3895)
• Change CartesianCKCAlgorithm.H (#3898)
• Fix: RTD (#3896)
• Fix: Laser-Ion Example Gather (#3894)
• Replace 3 occurrencess of NULL with std::nullptr (#3893)

23.05

Dependencies

AMReX: 23.05
PICSAR (development, incl. QED): 1903ecfff51a31a321d39790af90d8520c10537e
picmistandard: release 0.23.2
openPMD-api: release 0.15.1

List of PRs merged since the last release

This list was generated with

git log 23.04.. --format='- %s'

• Release 23.05 (#3887)
• Fix: rocFFT 5.5 (#3888)
• Add documentation to compile and use WarpX on Adastra (CINES) supercomputer (#3852)
• Use WARPX_ABORT_WITH_MESSAGE("msg") instead of amrex::Abort(Utils::TextMsg::Err("msg")) (#3879)
• Doc: Latest HDF5 on Summit (#3838)
• Docs: Boosted Frame Inputs (#3857)
• Fix typo in parameters doc (period -> intervals) (#3877)
• CI: macOS Cache Less (#3878)
• adding reconnection paper (#3886)
• Add new paper using WarpX (#3882)
• correct a formatting error in the Fugaku documentation (#3885)
• Build buffer masks on GPU (#3880)
• Moving window: fix logic to shift F,G fields w/ div(E),div(B) cleaning in PML (#3884)
• fix recently re-introduced bug (#3875)
• Fix missing GPU synchronization when QED lookup tables are loaded or generated (#3873)
• Shared memory charge and current deposition (#3368)
• Don't rely on managed memory in SmartUtils (#3874)
• Docs: suppress Sphinx warning of duplicate bibliography labels (#3869)
• AMReX: Weekly Update (#3868)
• Docs: use BibTeX citations in collisions theory section (#3865)
• Documentation For Using NCU (#3866)
• update ci to use ascent 0.9.1 (#3867)
• Import external E/B fields from openPMD files (#3584)
• Add python callback call when a break signal is recieved (#3849)
• Fix cell volume on axis and allow nonperiodic boundaries (#3820)
• Doc: Update of the Perlmutter Filesystem Note (#3839)
• Doc: libmamba for Conda (#3858)
• Doc: add instructions to use the Fugaku supercomputer (Riken) (#3856)
• move StringUtils.H to ablastr (#3864)
• Move KernelTimer.H to ablastr/parallelization (#3863)
• remove unnecessary include (#3862)
• Parameters doc: clean duplicated predefined density profile option (#3859)
• Use amrex::Math::powi(x) in WarpX (#3846)
• Doc: VisualPIC (#3854)
• Add check in addPlasma and addPlasmaFlux to respect random_theta (#3585)
• Add more PICMI options (#3773)
• Correct sign of the ChargeOnEB diagnostic (#3851)
• AMReX/PICSAR: Update to New Particle APIs (#3848)
• Fix particle reflecting boundaries in RZ (#3837)
• Doc: Tunneling Jupyter (#3841)
• AMReX: Weekly Update (#3845)
• AMReX/PICSAR: Weekly Update (#3822)
• Doc: HPSS Permissions (#3840)
• Doc: AAC22 Proceeding (#3836)
• amrex.the_arena_is_managed=0 (#3825)
• Add callback function before/after the initial Esolve (#3452)
• Doc: Typo "CUDA" in HIP Profiles
• Docs: LPA Collision Papers (#3827)
• Doc: Perlmutter CFS for SW & Optimas (#3835)
• Reflect density from non-periodic boundaries during deposition (#3711)
• Docs: Perlmutter CPU (#3831)
• Doc: Frontier Module Updates (#3832)
• DD fusion anneutronic branch (#3789)
• Add message if user sets old flag warpx.do_nodal (#3749)
• SyncRho: Pass References To Charge MultiFabs (#3814)
• Clean up calls to FillBoundary in FDTD part of OneStep_nosub (#3607)
• CI: add RZ Langmuir test w/ multi-J PSATD (#3612)
• Improve Python script to plot PSATD stencils (#3668)
• PSATD: call FFT of rho with explicit spectral index (#3720)
• Bug fix: use current finest level in loops over levels (#3798)
• Lattice: Line Docs & Rename (#3815)
• Contributing page update (#3819)
• Glossary update (#3818)
• ChargeOnEB: use atomic add on CPU, instead of critical (#3816)
• Fix loading particles from openPMD (#3810)
• GitHub Actions: macOS has 3 Cores (#3813)
• CI: Retry Simplify (#3812)
• Charge on EB: Use fp field instead of aux (#3809)
• code cleanup: make use of MultiParticleContainer::DepositCurrent in AddSpaceChargeFieldLabFrame (#3807)
• openPMD-api 0.15.1 (#3771)
• Glossary: IO, LPI Again (#3808)
• Implement thread-safe ChargeOnEB diagnostic (#3804)
• Adding Amrex Bucket into WarpX Python interface. (#3590)
• Make verboncoeur correction optional (#3802)
• [pre-commit.ci] pre-commit autoupdate (#3803)
• CI: Retry Apt Repos (#3801)

23.04

Dependencies

AMReX: 23.04
PICSAR (development, incl. QED): 1903ecfff51a31a321d39790af90d8520c10537e
picmistandard: release 0.23.2
openPMD-api: releases 0.14.2-0.14.*

List of PRs merged since the last release

This list was generated with

git log 23.03.. --format='- %s'

• Release 23.04 (#3800)
• Doc: Update Funding (#3799)
• CI: CMake-Easyinstall New Link (#3796)
• Frontier: User Early Access Docs (#3795)
• Docs: Frontier/Crusher ROCm 5.3/4 Perf (#3780)
• Add random seed specification to picmi (#3793)
• Slurm & LSF: How to Checkpoint & Terminate (#3778)
• Output enabled diagnostics (and checkpoint) on interrupt (#3790)
• Fix: openPMD Weighting Loading (#3783)
• Fix restart btd (#3734)
• Fix bugs related to azimuthal modes for multi-J algo in RZ geometry (#3764)
• Update Paper Badge to GB
• Enable calling SortParticlesForDeposition (#3762)
• Docs: start using BibTeX in theory section (#3787)
• AMReX: Weekly Update (#3788)
• CI: macOS allow deprecated declarations
• Update updateAMReX.py to match new CUDA yml file (#3772)
• ParaView: Add More Docs (#3785)
• include std::set, int template parameter (#3786)
• Refactoring of main.cpp to improve readability (#3784)
• Workaround for nvcc (#3782)
• Add FieldEnergy diagnostic in RZ (#3779)
• Fix "modernize-loop-convert" issues found with clang-tidy (#3774)
• Gaussian beam: allow 8-fold symmetry option (#3768)
• Fix typos and comments from #3708 (#3770)
• Fix add_particles to account for theta attribute with RZ (#3776)
• PICMI Boundary: Silver-Mueller (#3709)
• fix modernize use equals default check by clang tidy (#3775)
• CI: clean up Langmuir tests (#1613)
• AMReX: Weekly Update (#3767)
• [mini] Print full json file if checksum CI fails (#3753)
• Crusher (OLCF): ADIOS 2.8.3 (#3759)
• PICMI: add do_not_push and do_not_gather (#3766)
• Add G in CheckGuardCells (needed w/ div(B) cleaning) (#3761)
• Removed notes which were no longer restrictions on the allowed values of amr.ref_ratio, amr.ref_ratio_vect (#3763)
• Allow using different types for coordinates and values in {bi,tri}-linear interpolation functions (#3756)
• CI: fix bug in NVCC GNUMake yml file (#3765)
• Coulomb collisions: fix roundoff issues w/ gamma close to 1 (#3708)
• Fix typo in docstring (#3755)
• Fix typo in error message (#3760)
• Sort FieldProbe output using probe particle ids (#3746)
• remove spaces from headers in FieldMaximum, RhoMaximum and ParticleNumber red diags (#3751)
• NERSC: Update again
• NERSC: Jupyter Kernel Helper
• Fix figure reference in docs for input+output (#3741)
• Docs: fix default of warpx.n_field_gather_buffer (#3710)
• Deposition: Fix LB Cost Segfault (#3738)
• AMReX: Weekly Update (#3750)
• PICMI: add missing flags for latest algorithms (#3743)
• Fix Bucket getattr (#3747)
• Implement PICMI flag to set compute_max_step_from_btd (#3740)
• Spack: OpenMP w/o GPU (#3744)
• New user input for grid type (collocated, staggered, hybrid) (#3683)
• Fix typo in a comment (#3736)
• Fix handling of name passed into SetTag (#3735)
• Doc: Fix Builds, Disable all but HTML (#3737)
• Add test for DD fusion with intra-species collisions (#3660)
• Fix max_step from zmax_plasma... upon restart (#3732)
• Docs: more structure in numerics input section (#3730)
• AMReX: Weekly Update (#3729)
• RZ FDTD: fix bug w/ div(E) cleaning (extra c2) (#3726)
• Moving window: shift G MultiFab w/ div(B) cleaning (#3725)

23.03

Dependencies

AMReX: 23.03
PICSAR (development, incl. QED): 1903ecfff51a31a321d39790af90d8520c10537e
picmistandard: release 0.0.22
openPMD-api: releases 0.14.2-0.14.*

List of PRs merged since the last release

This list was generated with

git log 23.02.. --format='- %s'

• Release 23.03 (#3719)
• GB: Added DOI (#3718)
• AMReX: Weekly Update (#3715)
• Change plotfile RZ allowed diags to r,t from x,y (#3663)
• Reduced diagnostics: charge on the embedded boundary (#3648)
• Doc: Lawrencium (LBNL) Machine (#3700)
• Fix getBulkMomentum for Maxwellian distributions (#3705)
• Add option to increase max_step or stop_time to fill BTD (#3693)
• Doc: Perlmutter 80 GB GPUs (#3706)
• Fix Silver-Mueller boundary condition in 1D (#3703)
• Doc: HPC build/bin (#3675)
• AMReX: Weekly Update (#3701)
• Renamed "particle_vel" to "particle_mom" (#3672)
• Add warning message in RZ for < 2 azimuthal modes (#3655)
• GetExternalEBField: Use AMReX's CompileTimeOption ParallelFor (#3696)
• Add FieldReduction and ParticleHistogram to PICMI (#3697)
• add flag to picmi FieldDiagnostic for whether particle data should be saved along with the field data (#3699)
• Update Crusher Modules to cce/15.0.0 and others (#3688)
• Pass seed for gpu in ResetRandomSeed (#3682)
• Updated gitignore with vscode-specific folder (#3685)
• CI & Bug Fixes: 1D & 2D Compile (#3680)
• Fix bug in mirror with F,G fields (#3681)
• Bug fix: retain particles in boundary buffer during Redistribute() (#3679)
• Pre-Commit: Smaller Files & NB (#3678)
• AMReX: Weekly Update (#3677)

23.02

Dependencies

AMReX: 23.02
PICSAR (development, incl. QED): 1903ecfff51a31a321d39790af90d8520c10537e
picmistandard: release 0.0.22
openPMD-api: releases 0.14.2-0.14.*

List of PRs merged since the last release

This list was generated with

git log 23.01.. --format='- %s'

• Bug fix : Coarse patch dx for external field init (#3674)
• Clean warning on unused function (#3656)
• Add all the elements from Z=87 (Fr) to Z=100 (Fm) to the ionization table (#3670)
• Fix a bug in 1D PEC (#3669)
• fix some issues in WarpX 1D (#3671)
• RZ: abort if warpx.numprocs[0] > 1 with PSATD (#3615)
• Docs: Update Crusher (OLCF) Submission (#3601)
• Doc: NAPAC22 DOI (#3614)
• Release 23.02 (#3667)
• Doc: Add ARTEMIS Publications (#3647)
• add elements from Z=55 to Z=85 to the ionization table (#3666)
• ADIOS2: Fix BTD Particle Resize w/ Empty Ranks (#3657)
• Use a simpler expression for particle energy for reduced diagnostics. (#3650)
• Docs: Spack Binary Caches (#3628)
• Docs: Summit Jupyter HDF5 Back (#3629)
• Perlmutter (NERSC): New Boost Module (#3651)
• Fix NUniformPerCell for 1D (#3659)
• updates classical radiation reaction entry in docs (#3661)
• Add Sr, Y, Zr, Nb, Mo, Tc, Ru, Rh, Pd, Ag, Cd, In, Sn, Sb, Te, I, Xe to the ionization table (#3652)
• [pre-commit.ci] pre-commit autoupdate (#3653)
• CI: Unbreak Pre-Commit
• Docs: CCache Perlmutter (NERSC) (#3619)
• Implement linear interpolation for both cell-centered and nodal data types (#3638)
• add K,Ca,Sc,Zn,Ga,Ge,As,Se,Br to ionization tables (#3646)
• AMReX/PICSAR: Weekly Update (#3634)
• Clean loadbalance params (#3632)
• change github actions to use ascent 0.9.0 container (#3642)
• Add ionization support for Titanium (#3645)
• Docs: Fix n_rz_azimuthal_modes (#3643)
• Fix few includes in WarpXAMReXInit.cpp/H and TextMsg.cpp using IWYU tool (#3627)
• [pre-commit.ci] pre-commit autoupdate (#3635)
• Fix bug with PML in 2D when compiling with EB (#3637)
• added space to warning message when too many boxes per GPU (#3633)
• CI: Cache & Checkout Action v3 (#3620)
• Modify refined injection CI test for anisotropic ref ratio (#3605)
• [pre-commit.ci] pre-commit autoupdate (#3626)
• Doc: Taurus (ZIH) A100 (#3611)
• replaced vector.insert with std::copy to avoid issues with g++ 12 (#3625)
• Summit (OLCF): No Prepend in jsrun (#3623)
• Fix segfault in interpolation with anisotropic ref ratio (#3613)
• EB potential python interface (#3624)
• AMReX: Weekly Update (#3622)
• Fix Doxygen Warnings (#3616)
• AMReX/PICSAR: Weekly Update (#3610)
• Correct typo in PML+PSATD warning message (#3608)
• CMake: Lib Symlink w/ Complex Paths (#3602)
• Vay deposition not implemented with multi-J algorithm (#3606)
• add local flag to ParticleBoundaryBuffer::getNumParticlesInContainer (#3586)
• Docs: Perlmutter (NERSC) Module Update (#3599)
• For the tridiag, remove the guard cells since they are not needed (#3604)
• Generalize interpolation routines in diags for anisotropic ref ratio (#3603)
• Refined injection with anisotropic mesh refinement ratio (#3464)
• Fix bug for intra-species Coulomb collisions (#3526)

23.01

Dependencies

AMReX: 23.01
PICSAR (development, incl. QED): 006f65f332681f13de47c16fbd41c11f1e346764
picmistandard: release 0.0.22
openPMD-api: releases 0.14.2-0.14.*

List of PRs merged since the last release

This list was generated with

git log 22.12.. --format='- %s'

• Release 23.01 (#3598)
• fix two issues with unchecked possibly null pointer found with CodeQL (#3582)
• Docs: Fix some typos (#3593)
• [pre-commit.ci] pre-commit autoupdate (#3594)
• Fix a Bug in 1D ES (#3597)
• Update AMReX (GCC 7.5 & Ascent) (#3592)
• Feature magnetostatic solver (#3551)
• AMReX/PICSAR: Weekly Update (#3578)
• CMake: ADIOS1 off by default (#3591)
• Adding radial weighting at r=0 for Jr if nodal. (#3589)
• Avoid touching device memory on host in FieldProbe (#3579)
• CI: Unbreak macOS Python3 (#3587)
• Allow const_dt with EM and check it for ES (#3561)
• Include fusion reactions in documentation (#3570)
• Docs: Fix HTML5 for Install Logos (#3588)
• Add accelerator lattice, starting with quadrupoles (#3063)
• [pre-commit.ci] pre-commit autoupdate (#3580)
• Fix typo in documentation for Haswell (#3583)
• managed memory for user defined attribs in addplasma (#3576)
• Docs: Profiler Sync (Debug) (#3571)
• Clean up documentation (#3542)
• Docs: rst Formatting Issue in GB Paper
• Add a new section on domain decomposition to the docs. (#3572)
• Docs: add photo_species input param and fix typo (#3575)
• Refactor update of auxiliary data for electrostatic solver (#3573)
• Allow surface flux injection from the domain boundary (#3554)
• Fix Syntax in .zenodo.json

22.12

Dependencies

AMReX: 22.12
PICSAR (development, incl. QED): 006f65f332681f13de47c16fbd41c11f1e346764
picmistandard: release 0.0.22
openPMD-api: releases 0.14.2-0.14.*

List of PRs merged since the last release

This list was generated with

git log 22.11.. --format='- %s'

• Typo: Fewer Ranks (Perf. Hint) (#3569)
• Release 22.12 (#3565)
• CodeQL Filter: One Level Deeper
• CI CodeQL: Filter Third Party (#3563)
• [pre-commit.ci] pre-commit autoupdate (#3564)
• Update documentation to compile and run on LUMI supercomputer (#3562)
• CI: CodeQL w/ 🔍
• Improve memory footprint for ParticleInitialize (#3392)
• CI: Source Checks on ubuntu 22.04 (#3558)
• Renamed currents in Vay deposition from j to D (#3557)
• CI: Concurrency Limit CodeQL
• Add CodeQL workflow for GitHub code scanning (#3555)
• Docs: Repo Vis Link (#3553)
• ABLASTR: Coarsen Functions (#3433)
• Highlights & References: Gordon Bell (#3552)
• PSATD: Implement First-Order Equations (#3466)
• Zenodo: Move Gunther to Contributors
• Fix the CUDA Aware part of the Perlmutter script. (#3549)
• [pre-commit.ci] pre-commit autoupdate (#3547)
• Update docutils version (#3546)
• Check rho pointer in if conditions for charge deposition (#3544)
• Clean up examples folders (#3545)
• PSATD: Rewrite Equations with/without Rho (#3343)
• Fix Esirkepov deposition in 1D (#3537)
• [pre-commit.ci] pre-commit autoupdate (#3540)
• fix bug with reduced diagnostic FieldProbe in 1d (#3535)
• enable the use of FieldProbe default parameter values (#3538)
• AMReX/PICSAR: Weekly Update (#3539)
• Take into account mean velocity in gaussian flux injection (#3514)
• allow initial fields to be set through the picmi interface (#3536)
• Speed up Vay current deposition (#3529)
• Assert for diag_type (prevent input typos) (#3532)
• AMReX/PICSAR: Weekly Update (#3530)
• Bugfix for "particle coordinates" with plane field probe reduced diagnostic (#3497)
• PushPX: GPU kernel optimization (#3402)
• Adding an if statement for the last step diagnostic (#3436)
• Add Python interface for flux injection (#3486)
• BTD-RZ Add multiple modes (#3482)
• Doc: remove obsolete section on reading BTD data (#3527)
• Move shared functionality between picmi.UniformDistribution and picmi.AnalyticDistribution into a parent class (#3476)
• AMReX/PICSAR: Weekly Update (#3522)
• [pre-commit.ci] pre-commit autoupdate (#3524)
• Abort when using Vay Deposition with FDTD (#3515)
• Centralize the multi fab allocation (#3484)
• CI: unbreak macOS (#3521)
• Flux injection: move particle only after performing checks (#3519)
• Fix warnings with ceil in BTD code (#3518)
• CI: unbreak macOS (2to3) (#3520)
• Use makeParser function for laser field parsing option (#3517)
• Vay Deposition: Filter D, Exchange Guard Cells of J (#3388)
• 2D/RZ Embedded Boundaries Bug Fix (#3510)
• BTD: remove old/legacy back-transformed diagnostics (#3485)
• Docs: Improve MPI Threading User FAQ (#3501)
• Allow None for Maxwell solver (#3504)
• Load balancing bug fix: remake MultiFabs for Vay deposition, current centering, time averaging (#3508)
• AMReX: Weekly Update (#3509)
• Clean Species Physical Properties (#3505)
• Add SymPy Notebook to Derive PSATD Equations (#3456)
• CMake: AMReX_INTALL Update (Shared) (#3503)
• Docs: Dependencies w/ Ascent & SENSEI (#3502)
• Summit (OLCF): Jupyter GPFS HDF5 Issues (#3498)
• Perlmutter (NERSC): Finish Affinity Control (#3495)
• Allow arbitrary laser antenna normal in picmi (#3477)

22.11

Dependencies

AMReX: 22.11
PICSAR (development, incl. QED): 4252e567089fce30d2a3a82d78998e8d3d8220c2
picmistandard: release 0.0.20
openPMD-api: releases 0.14.2-0.14.*

List of PRs merged since the last release

This list was generated with

git log 22.10.. --format='- %s'

• Release 22.11 (#3499)
• CUDA CI: Ubuntu 20.04+ (#3496)
• Perlmutter (NERSC): Update Modules & Jobscript (#3493)
• Implement D+D and D+He fusion (#3257)
• AMReX: Weekly Update (#3492)
• Add BTD notes to FAQ section (#3473)
• BTD fields with RZ + openPMD - single mode only (#3350)
• Modify naming of species in CI fusion test (#3490)
• For background stopping, added error checks of the user input (#3163)
• Fix Invalid Mem w/ Moving Window, LB & PMLs (#3450)
• ABLASTR: Always Sync Option (#3467)
• add warning if PML and PSATD are used together (#3489)
• Docs: LUMI (CSC) (#3488)
• Add neumann BC in WarpX PICMI interface (#3487)
• Add warning to set zmin and zmax for ion-acc example (#3323)
• Replace "none" BC with Neumann for electrostatic (#3483)
• Diagnostics: print when writing openPMD/Ascent/Sensei and BTD plotfile/openPMD (#3424)
• CI: oneAPI with -O1 (#3478)
• Add reduced diagnostics to picmi.py (#3475)
• AMReX: Weekly Update (#3479)
• Fix stair-case solver in 2D Cartesian (#2942)
• Do not query redundant do_back_transformed_particles (#3183)
• Fix unused import warnings in python analysis scripts (#3472)
• User-Specified Used Inputs File (#3462)
• OLCF Jupyter: Mamba is Pre-Installed (#3471)
• AMReX: Weekly Update (#3469)
• Update GCC Requirement (#3470)
• CI: Fix macOS OMP (#3465)
• Correct particle positions outside refined injection (#3463)
• openPMD Engines: Allow Params w/o Type (#3460)
• Docs: Expand Debugging Workflow (#3461)
• AMReX: Weekly Update (#3459)
• Add functions for reading particle id and cpu numbers correctly (#3457)
• Partial refactoring of the utils directory (#3404)
• Fix synchronization of nodal points in subcycling (#3455)
• Updated 1D CI tests with particles because of update of yt (#3458)
• Spack Desktop: Simpler CUDA Visualization (#3337)
• Doc: BLAS++/LAPACK++ on GitHub (#3449)
• openPMD: Shape of Constant Particle Records (#3451)
• BTD: Improve Z-Slice Message (#3440)
• Docs: Fix PICMI Builds (#3447)
• Doc: Dev FAQ Pinned Memory (#3437)

22.10

Dependencies

AMReX: 22.10-1-g13aa4df0f5
PICSAR (development, incl. QED): 4252e567089fce30d2a3a82d78998e8d3d8220c2
picmistandard: release 0.0.20
openPMD-api: releases 0.14.2-0.14.*

List of PRs merged since the last release

This list was generated with

git log 22.09.. --format='- %s'

• Release 22.10 (#3444)
• Use parser for input parameters of type long (#2506)
• Major update of the Python/picmi documentation (#3329)
• Sphinx Extension: Sphinx-Design (#3361)
• Lassen (LLNL): HDF5 1.12.2 (#3378)
• Docs: BELLA MVA PoP & Ion PRAB Published (#3435)
• Implement tridiag solver for 1D (#3431)
• Add quiet option to Summit post-proc. docs (#3434)
• Add 1d support to _libwarpx.py functions get_particle_X (#3421)
• AMReX/PICSAR: Weekly Update (#3412)
• enforce 3 components for some laser parameters (#3423)
• BTD diagnostics specified by intervals (#3367)
• fix labels in inputfiles (#3422)
• CI: Test New v. Legacy BTD in BTD_ReducedSliceDiag (#3371)
• Fix update of particles flushed already in BTD (#3419)
• Fix compilation of RZ version on GPU (#3418)
• Add option to deposit laser on main grid (#3235)
• PSATD: More Options for Time Dependency of J, Rho (#3242)
• Correct and test fusion module in RZ geometry (#3255)
• More fixes for capacitive_discharge PICMI tests (#3416)
• Add beta function to BeamRelevant (#3372)
• Fix value of particle container m_do_back_transformed_particles when there are multiple BT diagnostics (#3184)
• Zenodo: Add Marco Garten (#3414)
• Fixes to Physics_applications/capacitive_discharge/PICMI* (#3413)
• Improve docstrings for some physical constants (#3410)
• Display an ASCII art logo on standard output (#3382)
• ABLASTR: Fix Stray Include in ChargeDeposition (#3406)
• ABLASTR: Constants (#3405)
• Update highlights with new PRX paper (#3408)
• add species name to a couple of error messages (#3381)
• Use blaspp::gemm on GPU for Hankel transform (#3383)
• Frontier/Crusher: Less Invasive libFabric Work-Around (#3396)
• ABLASTR: Fix Stray Include in DepositCharge (#3393)
• use getWithParser (#3394)
• ABLASTR: Move Used Inputs Helper (#3376)
• AMReX: Weekly Update (#3387)
• Docs: Crusher (OLCF) for PSATD+RZ (#3386)
• Docs: Update Crusher (OLCF) (#3380)
• SyncCurrent: Split Filter and Sum over Guard Cells (#3222)
• Frontier/Crusher: rocFFT Cache Control (#3366)
• Updated name for Elisa Rheaume in zenodo & Field Probe files (#3379)
• Fix: ABLASTR nvcc Phi Fine/Coarse (#3374)
• Fix perlmutter script. (#3375)
• CI: Add 2D/3D Langmuir Tests w/ Multi-J PSATD (#3363)
• Docs: Fix DOI Link Formatting
• Update highlights.rst (#3373)
• Avoid division by 0 in plasma lenses (#3370)
• CI: Test New v. Legacy BTD in RigidInjection_BTD (#3327)