diff --git a/docs/e1000-migration/index.md b/docs/e1000-migration/index.md
index 6cec834d..7392acca 100644
--- a/docs/e1000-migration/index.md
+++ b/docs/e1000-migration/index.md
@@ -19,7 +19,7 @@ It covers:
This change should be transparent to users and the TOTP and ssh keys should work as previously
If users do experience issues then please reset your TOTP and ssh keys and try to reconnect.
-If issues persist, then please contact the service desk
+If issues persist, then please [contact the service desk](mailto:support@cirrus.ac.uk)
## New storage -> Data migration
@@ -50,59 +50,50 @@ We are taking the opportunity to update modules and remove outdated modules.
Package/module |
-Owner |
Advice for users |
Documentation? |
Comments |
altair-hwsolvers/13.0.213 |
-William |
Please contact the service desk if you wish to use Altair Hyperworks. |
|
|
altair-hwsolvers/14.0.210 |
-William |
Please contact the service desk if you wish to use Altair Hyperworks. |
|
|
ansys/18.0 |
-William |
Please contact the service desk if you wish to use ANSYS Fluent. |
|
|
ansys/19.0 |
-William |
Please contact the service desk if you wish to use ANSYS Fluent. |
|
|
autoconf/2.69 |
-MichaelB |
Please use autoconf/2.71 |
n/a |
|
bison/3.6.4
|
-Sebastien |
Please use bison/3.8.2 |
|
|
boost/1.67.0 |
-Xu |
Please use boost/1.84.0 |
n/a |
|
boost/1.73.0 |
-Xu |
Please use boost/1.84.0 |
|
|
@@ -110,14 +101,12 @@ We are taking the opportunity to update modules and remove outdated modules.
cmake/3.17.3
cmake/3.22.1 |
-Kevin |
Please use cmake/3.25.2 |
|
|
CUnit/2.1.3 |
-William |
Please contact the service desk if you wish to use CUnit. |
|
|
@@ -125,21 +114,18 @@ We are taking the opportunity to update modules and remove outdated modules.
dolfin/2019.1.0-intel-mpi
dolfin/2019.1.0-mpt |
-Sebastien |
Dolfin is no longer supported and will not be replaced. |
|
See also RFC 158 |
eclipse/2020-09 |
-William |
Please contact the service desk if you wish to use Eclipse. |
|
|
expat/2.2.9 |
-MichaelB |
Please use expat/2.6.0 |
n/a |
|
@@ -147,7 +133,6 @@ We are taking the opportunity to update modules and remove outdated modules.
fenics/2019.1.0-intel-mpi
fenics/2019.1.0-mpt |
-Sebastien |
Fenics is no longer supported and will not be replaced. |
|
See also RFC158 |
@@ -160,7 +145,6 @@ We are taking the opportunity to update modules and remove outdated modules.
fftw/3.3.9-impi19-gcc8
fftw/3.3.10-intel19-mpt225
fftw/3.3.10-ompi4-cuda116-gcc8
-Xu |
Please use one of the following
fftw/3.3.10-gcc10.2-mpt2.25
@@ -179,35 +163,30 @@ We are taking the opportunity to update modules and remove outdated modules.
flacs-cfd/21.2
flacs-cfd/22.1
|
-Kevin |
Please contact the helpdesk if you wish to use FLACS. |
REMOVE documentation (but not yet) |
|
forge/22.1.3 |
-Kevin |
Please use forge/23.1.1 |
UPDATE REQUIRED |
PENDING |
gcc/6.2.0
|
-William |
Please use gcc/8.2.0 or later |
|
|
gcc/6.3.0
|
-William |
Please use gcc/8.2.0 or later |
|
|
gcc/12.2.0-offload
|
-William |
Please use gcc/12.3.0-offload |
|
|
@@ -216,14 +195,12 @@ We are taking the opportunity to update modules and remove outdated modules.
gdal/2.1.2-gcc
gdal/2.1.2-intel
gdal/2.4.4-gcc
-MichaelB |
Please use gcc/3.6.2-gcc |
n/a |
|
git/2.21.0 |
-
|
Please use git/2.37.3 |
|
No change: automatically loads git/2.37.3 via epcc/utils |
@@ -232,21 +209,18 @@ We are taking the opportunity to update modules and remove outdated modules.
gmp/6.2.0-intel
gmp/6.2.1-mpt
gmp/6.3.0-mpt
-Eleanor |
Please use gmp/6.3.0-gcc or gmp/6.3.0-intel |
|
|
gnu-parallel/20200522-gcc6 |
-MichaelB |
Please use gnu-parallel/20240122-gcc10 |
TODO |
|
gromacs/2022.1 gromacs/2022.1-gpu gromacs/2022.3-gpu |
-RuiA |
Please use one of: gromacs/2023.4 gromacs/2023.4-gpu |
|
@@ -254,35 +228,30 @@ We are taking the opportunity to update modules and remove outdated modules.
hdf5parallel/1.10.4-intel18-impi18 |
-William |
Please use hdf5parallel/1.14.3-intel20-impi20 |
|
|
hdf5parallel/1.10.6-gcc6-mpt225 |
-William |
Please use hdf5parallel/1.14.3-gcc10-mpt225 |
|
|
hdf5parallel/1.10.6-intel18-mpt225 |
-William |
Please use hdf5parallel/1.14.3-intel20-mpt225 |
|
|
hdf5parallel/1.10.6-intel19-mpt225 |
-William |
Please use hdf5parallel/1.14.3-intel20-mpt225 |
|
|
hdf5serial/1.10.6-intel18 |
-William |
Please use hdf5serial/1.14.3-intel20 |
|
|
@@ -291,35 +260,30 @@ We are taking the opportunity to update modules and remove outdated modules.
horovod/0.25.0
horovod/0.25.0-gpu
horovod/0.26.1-gpu
-MichaelB |
Please use one of the pytorch or tensorflow modules |
TODO |
|
htop/3.1.2 |
-Installed by AJ |
Please use htop/3.2.1 |
|
|
intel 18.0 compilers etc |
-Kevin |
Please use Intel 19.5 or later; or oneAPI |
ADD ONEAPI information |
Should be moving to oneAPI |
intel 19.0 compilers etc |
-Kevin |
Please use Intel 19.5 or later |
|
|
lammps/23Jun2022_intel19_mpt lammps/8Feb2023-gcc8-impi lammps/23Sep2023-gcc8-impi lammps/8Feb2023-gcc8-impi-cuda118 lammps/23Sep2023-gcc8-impi-cuda118 |
-RuiA |
Please use one of:
lammps/15Dec2023-gcc10.2-impi20.4 lammps-gpu/15Dec2023-gcc10.2-impi20.4-cuda11.8 |
@@ -328,67 +292,57 @@ We are taking the opportunity to update modules and remove outdated modules.
libxkbcommon/1.0.1 |
-William |
Please contact the service desk if you wish to use libxkbcommon. |
|
|
libnsl/1.3.0 |
-Eleanor |
Please contact the helpdesk if you wish to use libnsl. |
|
Dependancy for STARCCM+. |
libpng/1.6.30 |
-(Xu) |
This is no longer supported as the central module. |
|
|
libtirpc/1.2.6 |
-Eleanor |
Please contact the helpdesk if you wish to use libtirpc. |
|
Dependancy for STARCCM+. |
libtool/2.4.6
|
-Sebastien |
Please use libtool/2.4.7 |
|
|
nco/4.9.3 |
-William |
Please use nco/5.1.9 |
|
|
nco/4.9.7 |
-William |
Please use nco/5.1.9 |
|
|
ncview/2.1.7 |
-William |
Please use ncview/2.1.10 |
|
|
netcdf-parallel/4.6.2-intel18-impi18 |
-William |
Please use netcdf-parallel/4.9.2-intel20-impi20 |
|
|
netcdf-parallel/4.6.2-intel19-mpt225 |
-William |
Please use netcdf-parallel/4.9.2-intel20-mpt225 |
|
|
@@ -398,7 +352,6 @@ We are taking the opportunity to update modules and remove outdated modules.
nvidia/cudnn/8.2.1-cuda-11.6
nvidia/cudnn/8.9.4-cuda-11.6
nvidia/cudnn/8.9.7-cuda-11.6
-MichaelB |
Please use one of the following
nvidia/cudnn/8.6.0-cuda-11.6
@@ -408,35 +361,30 @@ We are taking the opportunity to update modules and remove outdated modules.
|
nvidia/nvhpc/22.11-no-gcc |
-Kevin |
Use nvidia/nvhpc/22.11 |
|
|
nvidia/tensorrt/7.2.3.4 |
-MichaelB |
Please use nvidia/tensorrt/8.4.3.1-u2 |
TODO |
|
openfoam/v8.0 |
-Kevin |
Please consider a later version, e.g., v10.0 |
|
|
openfoam/v9.0 |
-Kevin |
Please consider a later version, e.g, v11.0 |
|
|
openfoam/v2006 |
-Kevin |
Please consider a later version, e.g., v2306 |
|
|
@@ -451,7 +399,6 @@ We are taking the opportunity to update modules and remove outdated modules.
openmpi/4.1.5
openmpi/4.1.5-cuda-11.6
-MichaelB |
Please use one of the following
openmpi/4.1.6
@@ -466,14 +413,12 @@ We are taking the opportunity to update modules and remove outdated modules.
|
petsc/3.13.2-intel-mpi-18
petsc/3.13.2-mpt |
-Kevin |
Please contact the helpdesk if you require a more recent version of PETSc. |
|
|
pyfr/1.14.0-gpu |
-MichaelB |
Please use pyfr/1.15.0-gpu |
TODO |
|
@@ -481,7 +426,6 @@ We are taking the opportunity to update modules and remove outdated modules.
pytorch/1.12.1
pytorch/1.12.1-gpu |
-MichaelB |
Please use one of the following
pytorch/1.13.1
@@ -493,14 +437,12 @@ We are taking the opportunity to update modules and remove outdated modules.
|
quantum-espresso/6.5-intel-19 |
-Eleanor |
Please use QE/6.5-intel-20.4 |
|
|
specfem3d |
-Juan |
Please contact the helpdesk if you wish to use SPECFEM3D |
|
|
@@ -512,7 +454,6 @@ We are taking the opportunity to update modules and remove outdated modules.
starccm+/15.04.010-R8 → 2020.2.1-R8
starccm+/15.06.008-R8 → 2020.3.1-R8
starccm+/16.02.009 → 2021.1.1
-Eleanor |
Please contact the helpdesk if you wish to use STAR-CCM+ |
|
|
@@ -521,7 +462,6 @@ We are taking the opportunity to update modules and remove outdated modules.
tensorflow/2.9.1-gpu
tensorflow/2.10.0
tensorflow/2.11.0-gpu
-MichaelB |
Please use one of the following
tensorflow/2.15.0
@@ -534,7 +474,6 @@ We are taking the opportunity to update modules and remove outdated modules.
ucx/1.9.0
ucx/1.9.0-cuda-11.6
ucx/1.9.0-cuda-11.8 |
-MichaelB |
Please use one of the following
ucx/1.15.0
@@ -547,12 +486,10 @@ We are taking the opportunity to update modules and remove outdated modules.
vasp-5.4.4-intel19-mpt220 |
|
|
-
|
NO VASP5 at all? |
zlib/1.2.11 |
-Kevin |
Please use zlib/1.3.1 |
|
nb. /usr/lib64 has 1.2.11 |