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This pipeline looks great for running Hi-C analyses--just wondering, do you currently or do you expect to in the future have support for other HPC cluster workload managers? My cluster uses SLURM and scientific linux and I've been having a difficult time getting it to work there. Would I just (hopefully) need to modify all the qsub options and commands in the qsub files in /code.main to be their equivalent SLURM commands? The other big difference I'd see is in loading of the modulefiles and what is available, but I think it's much easier to work around that.
Thanks,
Ittai
The text was updated successfully, but these errors were encountered:
Hi,
This pipeline looks great for running Hi-C analyses--just wondering, do you currently or do you expect to in the future have support for other HPC cluster workload managers? My cluster uses SLURM and scientific linux and I've been having a difficult time getting it to work there. Would I just (hopefully) need to modify all the qsub options and commands in the qsub files in /code.main to be their equivalent SLURM commands? The other big difference I'd see is in loading of the modulefiles and what is available, but I think it's much easier to work around that.
Thanks,
Ittai
The text was updated successfully, but these errors were encountered: