diff --git a/pisces/__init__.py b/pisces/__init__.py index 680d54c..6d7c300 100755 --- a/pisces/__init__.py +++ b/pisces/__init__.py @@ -78,6 +78,7 @@ def read_level_qc(fastq, output_dir, sample_name): 'nreads': 2000000, 'base_probs': '0.25,0.25,0.25,0.25,0.1', 'kmer': 5, + 'type': None, 'leftlimit': 1, 'rightlimit': -1, 'median-qual': 30,