cadc-2025-trigger-monitoring #89
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| # This workflow uses actions to automatically run the dry corridor drought trigger monitoring. | |
| # script. | |
| name: cadc-2025-trigger-monitoring | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| EMAIL_WHO: | |
| required: true | |
| type: choice | |
| default: "test" | |
| options: | |
| - "test" | |
| - "internal_chd" | |
| - "internal_ocha" | |
| - "full_list" | |
| RUN_DATE_USE: | |
| required: true | |
| type: choice | |
| default: "2024-04-05" | |
| options: | |
| - "2024-04-05" # primera last year | |
| - "2024-07-05" # postrera last year | |
| - "current" # realtime | |
| jobs: | |
| monitor: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| CHD_DS_EMAIL_USERNAME: ${{ secrets.CHD_DS_EMAIL_USERNAME }} | |
| CHD_DS_EMAIL_PASSWORD: ${{ secrets.CHD_DS_EMAIL_PASSWORD }} | |
| CHD_DS_HOST: ${{ secrets.CHD_DS_HOST }} | |
| CHD_DS_PORT: ${{ secrets.CHD_DS_PORT }} | |
| DS_AZ_BLOB_DEV_SAS: ${{ secrets.DS_AZ_BLOB_DEV_SAS }} | |
| DS_AZ_DB_PROD_UID_WRITE: ${{ secrets.DS_AZ_DB_PROD_UID_WRITE }} | |
| DS_AZ_DB_PROD_HOST: ${{ secrets.DS_AZ_DB_PROD_HOST }} | |
| DS_AZ_DB_PROD_PW_WRITE: ${{ secrets.DS_AZ_DB_PROD_PW_WRITE }} | |
| EMAIL_WHO: ${{ inputs.EMAIL_WHO || 'test' }} | |
| RUN_DATE_USE: ${{ inputs.RUN_DATE_USE || 'current' }} | |
| services: | |
| postgres: | |
| image: postgres:latest | |
| env: | |
| POSTGRES_USER: ${{ secrets.DS_AZ_DB_PROD_UID_WRITE }} | |
| POSTGRES_PASSWORD: ${{ secrets.DS_AZ_DB_PROD_PW_WRITE }} | |
| POSTGRES_DB: ${{ secrets.DS_AZ_DB_PROD_NAME }} | |
| POSTGRES_HOST: localhost | |
| ports: | |
| - 5432:5432 | |
| # needed because the postgres container does not provide a healthcheck | |
| options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.x' | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Install System Dependencies | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y \ | |
| libxml2-dev \ | |
| libgdal-dev \ | |
| libproj-dev \ | |
| libgeos-dev \ | |
| libudunits2-dev \ | |
| libsodium-dev \ | |
| libfreetype6-dev \ | |
| libcurl4-openssl-dev | |
| # - name: Clear Cache # shouldnt' be necessary | |
| # run: rm -rf ~/.cache | |
| - name: Cache R dependencies | |
| id: cache-r-deps | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: R-dependency-cache-${{ hashFiles('.github/depends_2025.R') }} | |
| - name: Install R dependencies | |
| if: steps.cache-r-deps.outputs.cache-hit != 'true' | |
| run: | | |
| Rscript .github/depends_2025.R | |
| # - name: Cache additional R dependencies | |
| # id: cache-r-deps-additional | |
| # uses: actions/cache@v4 | |
| # with: | |
| # path: ${{ env.R_LIBS_USER }} | |
| # key: R-dependency-cache-${{ hashFiles('.github/depends_additional_2025.R') }} | |
| # | |
| # - name: Install additonal R dependencies | |
| # if: steps.cache-r-deps-additional.outputs.cache-hit != 'true' | |
| # run: | | |
| # Rscript .github/depends_additional_2025.R | |
| - name: Run R-script-test-env-vars | |
| shell: bash | |
| run: Rscript ./src/monitoring_2025/test_gha_settings.R | |
| - name: Run R-script-cadc-2025-trigger-monitoring | |
| shell: bash | |
| run: Rscript ./src/monitoring_2025/update_activation_status.R | |