Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

plotBed hangs on large bedfile #21

Open
TCBroad opened this issue Apr 13, 2021 · 0 comments
Open

plotBed hangs on large bedfile #21

TCBroad opened this issue Apr 13, 2021 · 0 comments

Comments

@TCBroad
Copy link

TCBroad commented Apr 13, 2021

I'm trying to plot a bedfile with chromstart = 4077 and chromend = 2153224, but it never completes. It seems to hang somewhere chromend = 440,000 and 450,000. values lower than this take around 1 min on my pc. I left it overnight running the full amount but it never finished.

Is there any way around this?

Thanks!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant