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environmentMain.yaml
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environmentMain.yaml
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name: FdR
channels:
- bioconda
- aleg
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
- conda-forge
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- abseil-cpp=20211102.0=h93e1e8c_2
- aioeasywebdav=2.4.0=py37h89c1867_1001
- aiohttp=3.8.3=py37h540881e_0
- aiosignal=1.3.1=pyhd8ed1ab_0
- amply=0.1.5=pyhd8ed1ab_0
- appdirs=1.4.4=pyh9f0ad1d_0
- arrow-cpp=8.0.0=py37h60b952e_1
- async-timeout=4.0.2=pyhd8ed1ab_0
- asynctest=0.13.0=py_0
- attmap=0.13.2=pyhd8ed1ab_0
- attrs=22.2.0=pyh71513ae_0
- aws-c-common=0.4.57=he6710b0_1
- aws-c-event-stream=0.1.6=h2531618_5
- aws-checksums=0.1.9=he6710b0_0
- aws-sdk-cpp=1.8.185=hce553d0_0
- backports=1.0=pyhd8ed1ab_3
- backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
- bcrypt=3.2.2=py37h540881e_0
- biopython=1.79=py37h540881e_2
- boost-cpp=1.81.0=he95ae9e_0
- boto3=1.26.99=pyhd8ed1ab_0
- botocore=1.29.99=pyhd8ed1ab_0
- brotlipy=0.7.0=py37h540881e_1004
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2022.12.7=ha878542_0
- cachetools=5.3.0=pyhd8ed1ab_0
- certifi=2022.12.7=pyhd8ed1ab_0
- cffi=1.15.1=py37h43b0acd_1
- charset-normalizer=2.1.1=pyhd8ed1ab_0
- coin-or-cbc=2.10.8=h3786ebc_0
- coin-or-cgl=0.60.6=h6f57e76_2
- coin-or-clp=1.17.7=hc56784d_2
- coin-or-osi=0.108.7=h2720bb7_2
- coin-or-utils=2.11.6=h202d8b1_2
- coincbc=2.10.8=0_metapackage
- colorama=0.4.6=pyhd8ed1ab_0
- colorlog=6.7.0=py37h89c1867_0
- conda=22.9.0=py37h89c1867_1
- conda-package-handling=2.0.2=pyh38be061_0
- conda-package-streaming=0.7.0=pyhd8ed1ab_1
- configargparse=1.5.3=pyhd8ed1ab_0
- connection_pool=0.0.3=pyhd3deb0d_0
- cryptography=38.0.2=py37h38fbfac_1
- curl=7.87.0=h5eee18b_0
- datrie=0.8.2=py37h540881e_4
- defusedxml=0.7.1=pyhd8ed1ab_0
- deprecated=1.2.13=pyh6c4a22f_0
- docutils=0.19=py37h89c1867_0
- dpath=2.0.6=py37h89c1867_1
- dropbox=11.36.0=pyhd8ed1ab_0
- exceptiongroup=1.1.1=pyhd8ed1ab_0
- expat=2.5.0=h27087fc_0
- filechunkio=1.8=py_2
- filelock=3.10.7=pyhd8ed1ab_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-forge=1=0
- freetype=2.12.1=hca18f0e_1
- frozenlist=1.3.1=py37h540881e_0
- ftputil=5.0.4=pyhd8ed1ab_0
- gflags=2.2.2=he1b5a44_1004
- gitdb=4.0.10=pyhd8ed1ab_0
- gitpython=3.1.31=pyhd8ed1ab_0
- glog=0.6.0=h6f12383_0
- google-api-core=2.11.0=pyhd8ed1ab_0
- google-api-python-client=2.82.0=pyhd8ed1ab_0
- google-auth=2.16.3=pyh1a96a4e_0
- google-auth-httplib2=0.1.0=pyhd8ed1ab_1
- google-cloud-core=2.3.2=pyhd8ed1ab_0
- google-cloud-storage=2.7.0=pyh1a96a4e_0
- google-crc32c=1.1.2=py37h5d4fa31_3
- google-resumable-media=2.4.1=pyhd8ed1ab_0
- googleapis-common-protos=1.57.1=pyhd8ed1ab_0
- grpc-cpp=1.46.1=h33aed49_1
- grpcio=1.46.3=py37he500948_0
- hdf5=1.12.1=nompi_h2386368_104
- httplib2=0.22.0=pyhd8ed1ab_0
- humanfriendly=10.0=py37h89c1867_2
- icu=70.1=h27087fc_0
- idna=3.4=pyhd8ed1ab_0
- importlib-metadata=4.11.4=py37h89c1867_0
- importlib_metadata=4.11.4=hd8ed1ab_0
- importlib_resources=5.12.0=pyhd8ed1ab_0
- iniconfig=2.0.0=pyhd8ed1ab_0
- jinja2=3.1.2=pyhd8ed1ab_1
- jmespath=1.0.1=pyhd8ed1ab_0
- jsonschema=4.17.3=pyhd8ed1ab_0
- jupyter_core=4.11.1=py37h89c1867_0
- k8=0.2.5=hd03093a_2
- kaleido-core=0.2.1=h3644ca4_0
- keyutils=1.6.1=h166bdaf_0
- krb5=1.19.3=h3790be6_0
- ld_impl_linux-64=2.40=h41732ed_0
- libabseil=20211102.0=cxx17_h48a1fff_2
- libarchive=3.5.2=hb890918_3
- libblas=3.9.0=16_linux64_openblas
- libbrotlicommon=1.0.9=h166bdaf_8
- libbrotlidec=1.0.9=h166bdaf_8
- libbrotlienc=1.0.9=h166bdaf_8
- libcblas=3.9.0=16_linux64_openblas
- libcrc32c=1.1.2=h9c3ff4c_0
- libcurl=7.87.0=h91b91d3_0
- libdeflate=1.6=h516909a_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libevent=2.1.10=h9b69904_4
- libffi=3.4.2=h7f98852_5
- libgcc-ng=12.2.0=h65d4601_19
- libgfortran-ng=12.2.0=h69a702a_19
- libgfortran5=12.2.0=h337968e_19
- libgomp=12.2.0=h65d4601_19
- libiconv=1.17=h166bdaf_0
- liblapack=3.9.0=16_linux64_openblas
- liblapacke=3.9.0=16_linux64_openblas
- libmamba=0.27.0=h0dd8ff0_0
- libmambapy=0.27.0=py37h1ee4b26_0
- libnghttp2=1.46.0=hce63b2e_0
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.21=pthreads_h78a6416_3
- libpng=1.6.39=h753d276_0
- libprotobuf=3.20.3=he621ea3_0
- libsodium=1.0.18=h36c2ea0_1
- libsolv=0.7.23=h3eb15da_0
- libsqlite=3.40.0=h753d276_0
- libssh2=1.10.0=haa6b8db_3
- libstdcxx-ng=12.2.0=h46fd767_19
- libthrift=0.15.0=he6d91bd_1
- libuuid=2.32.1=h7f98852_1000
- libxml2=2.10.3=hca2bb57_4
- libzlib=1.2.13=h166bdaf_4
- logmuse=0.2.6=pyh8c360ce_0
- lz4-c=1.9.4=hcb278e6_0
- lzo=2.10=h516909a_1000
- mamba=0.27.0=py37h6dacc13_0
- markdown-it-py=2.2.0=pyhd8ed1ab_0
- markupsafe=2.1.1=py37h540881e_1
- mathjax=2.7.7=ha770c72_3
- mdurl=0.1.0=pyhd8ed1ab_0
- minimap2=2.24=h7132678_1
- multidict=6.0.2=py37h540881e_1
- nanocount=1.0.0.post6=0
- nanoget=1.18.1=pyhdfd78af_0
- nanomath=1.2.1=pyhdfd78af_0
- nanoplot=1.41.0=pyhdfd78af_0
- nbformat=5.8.0=pyhd8ed1ab_0
- ncurses=6.3=h27087fc_1
- nspr=4.35=h27087fc_0
- nss=3.89=he45b914_0
- numpy=1.21.6=py37h976b520_0
- oauth2client=4.1.3=py_0
- openssl=1.1.1t=h0b41bf4_0
- orc=1.7.4=hb3bc3d3_1
- packaging=23.0=pyhd8ed1ab_0
- pandas=1.3.5=py37he8f5f7f_0
- paramiko=3.1.0=pyhd8ed1ab_0
- peppy=0.35.5=pyhd8ed1ab_0
- pip=23.0.1=pyhd8ed1ab_0
- pkgutil-resolve-name=1.3.10=pyhd8ed1ab_0
- plac=1.3.5=pyhd8ed1ab_0
- plotly=5.13.1=pyhd8ed1ab_0
- pluggy=1.0.0=py37h89c1867_3
- ply=3.11=py_1
- prettytable=3.6.0=pyhd8ed1ab_0
- protobuf=3.20.3=py37h6a678d5_0
- psutil=5.9.3=py37h540881e_0
- pulp=2.6.0=py37h89c1867_1
- pyarrow=8.0.0=py37h992f0b0_0
- pyasn1=0.4.8=py_0
- pyasn1-modules=0.2.7=py_0
- pybind11-abi=4=hd8ed1ab_3
- pybiotools=0.2.11=0
- pycosat=0.6.4=py37h540881e_0
- pycparser=2.21=pyhd8ed1ab_0
- pygments=2.14.0=pyhd8ed1ab_0
- pynacl=1.5.0=py37h540881e_1
- pyopenssl=23.1.0=pyhd8ed1ab_0
- pyparsing=3.0.9=pyhd8ed1ab_0
- pyrsistent=0.18.1=py37h540881e_1
- pysam=0.16.0=py37ha9a96c6_0
- pysftp=0.2.9=py_1
- pysocks=1.7.1=py37h89c1867_5
- pytest=7.2.0=py37h89c1867_0
- python=3.7.12=hb7a2778_100_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-fastjsonschema=2.16.3=pyhd8ed1ab_0
- python-irodsclient=1.1.6=pyhd8ed1ab_0
- python-kaleido=0.2.1=pyhd8ed1ab_0
- python_abi=3.7=3_cp37m
- pytz=2023.2=pyhd8ed1ab_0
- pyu2f=0.1.5=pyhd8ed1ab_0
- pyyaml=6.0=py37h540881e_4
- re2=2022.04.01=h27087fc_0
- readline=8.2=h8228510_1
- reproc=14.2.4=h0b41bf4_0
- reproc-cpp=14.2.4=hcb278e6_0
- requests=2.28.2=pyhd8ed1ab_0
- reretry=0.11.8=pyhd8ed1ab_0
- rich=13.3.3=pyhd8ed1ab_0
- rsa=4.9=pyhd8ed1ab_0
- ruamel_yaml=0.15.80=py37h540881e_1007
- s3transfer=0.6.0=pyhd8ed1ab_0
- scipy=1.7.3=py37hf2a6cf1_0
- setuptools=59.8.0=py37h89c1867_1
- six=1.16.0=pyh6c4a22f_0
- slacker=0.14.0=py_0
- slow5tools=0.6.0=h0326b38_2
- smart_open=6.3.0=pyhd8ed1ab_1
- smmap=3.0.5=pyh44b312d_0
- snakemake=7.24.0=hdfd78af_1
- snakemake-minimal=7.24.0=pyhdfd78af_0
- snappy=1.1.10=h9fff704_0
- sqlite=3.40.0=h4ff8645_0
- stone=3.3.1=pyhd8ed1ab_0
- stopit=1.1.2=py_0
- tabulate=0.9.0=pyhd8ed1ab_1
- tenacity=8.2.2=pyhd8ed1ab_0
- throttler=1.2.1=pyhd8ed1ab_0
- tk=8.6.12=h27826a3_0
- tomli=2.0.1=pyhd8ed1ab_0
- toolz=0.12.0=pyhd8ed1ab_0
- toposort=1.7=pyhd8ed1ab_0
- tqdm=4.65.0=pyhd8ed1ab_1
- traitlets=5.9.0=pyhd8ed1ab_0
- typing-extensions=4.5.0=hd8ed1ab_0
- typing_extensions=4.5.0=pyha770c72_0
- ubiquerg=0.6.2=pyhd8ed1ab_0
- uritemplate=4.1.1=pyhd8ed1ab_0
- urllib3=1.26.15=pyhd8ed1ab_0
- utf8proc=2.6.1=h27cfd23_0
- veracitools=0.1.3=py_0
- wcwidth=0.2.6=pyhd8ed1ab_0
- wheel=0.40.0=pyhd8ed1ab_0
- wrapt=1.12.1=py37h5e8e339_3
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- yaml-cpp=0.7.0=h27087fc_2
- yarl=1.7.2=py37h540881e_2
- yte=1.5.1=py37h89c1867_0
- zipp=3.15.0=pyhd8ed1ab_0
- zlib=1.2.13=h166bdaf_4
- zstandard=0.18.0=py37h540881e_0
- zstd=1.5.2=h3eb15da_6
prefix: /home/chenxf/miniconda3/envs/FdR