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Ensure descriptive file names and consistency, enlarge Python noteboo…

alexpopingapushed 1 commit to main • 90c7e72…967491e • 
7 days ago

Finalise ferritin processing Python pipeline

alexpopingapushed 1 commit to main • 652795e…90c7e72 • 
7 days ago

Update notebook to output dihedral angles and scores from truncated s…

alexpopingapushed 1 commit to main • ce5544f…652795e • 
7 days ago

Remove unneeded POSA alignments and rename files

alexpopingapushed 1 commit to main • 34d4f3a…ce5544f • 
7 days ago

Truncate sequences and structures to ensure equal length

alexpopingapushed 1 commit to main • b81da38…34d4f3a • 
7 days ago

Update ferritin data pipeline Py notebooks

alexpopingapushed 1 commit to main • 66ac28a…b81da38 • 
7 days ago

Add dihedral angle alignment of ferritins and pdb-to-da conversion co…

alexpopingapushed 1 commit to main • 2f65ac8…66ac28a • 
8 days ago

Add Python notebook for processing alignment and MUSTANG aligned ferr…

alexpopingapushed 1 commit to main • 1cdd625…2f65ac8 • 
9 days ago

Update POSA alignments

alexpopingapushed 1 commit to main • 0e10a53…1cdd625 • 
11 days ago

add structural alignments

alexpopingapushed 1 commit to main • a996ab7…0e10a53 • 
11 days ago

Add aaRS X-ray crystal structures from PDB

alexpopingapushed 1 commit to main • 996a582…a996ab7 • 
11 days ago

Remove installation/import of unnecessary libraries

alexpopingapushed 1 commit to main • b560fc3…996a582 • 
11 days ago

Add Python notebook to obtain and check ferritin crystal structures

alexpopingapushed 1 commit to main • 6b863a6…b560fc3 • 
11 days ago

Merge branch 'main' of https://github.com/alexeid/toroidalDiffusion

alexpopingapushed 2 commits to main • 2d0a2e9…6b863a6 • 
11 days ago

Cache siteLK #13

clem-xrypushed 1 commit to main • 1b61d55…2d0a2e9 • 
13 days ago

revert back to cachebranchLK version #12

clem-xrypushed 1 commit to main • c667342…1b61d55 • 
15 days ago

Change beanch caching to no caching #12

clem-xrypushed 1 commit to main • 6eed1c2…c667342 • 
28 days ago

site caching #12

clem-xrypushed 1 commit to main • 77cbeeb…6eed1c2 • 
on Feb 24

add test xml and outputs #13

walterxiepushed 1 commit to main • f017fcf…77cbeeb • 
on Feb 20

refactor #13

walterxiepushed 1 commit to main • ab54f2d…f017fcf • 
on Feb 20

slow caching #13

walterxiepushed 1 commit to main • 1cb0739…ab54f2d • 
on Feb 20

update param to make the same fig

walterxiepushed 1 commit to main • 69beea0…1cb0739 • 
on Feb 7

change muT to store fixed time interval trajectory #12

clem-xrypushed 1 commit to main • 104878e…69beea0 • 
on Feb 2

complete caching #13

walterxiepushed 1 commit to main • eec5671…104878e • 
on Jan 31

delete trees #13

walterxiepushed 1 commit to main • a89d88b…eec5671 • 
on Jan 31

add test result #13

walterxiepushed 2 commits to main • 9c2793c…a89d88b • 
on Jan 31

update simulation #12

walterxiepushed 1 commit to main • 93d2756…9c2793c • 
on Jan 30

change muT to store fixed time interval trajectory #6

clem-xrypushed 1 commit to main • d429425…93d2756 • 
on Jan 30

update XML #12

walterxiepushed 1 commit to main • a46efa7…d429425 • 
on Jan 29

add XML #12

walterxiepushed 1 commit to main • edcd762…a46efa7 • 
on Jan 29