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Inquiry on parameter tuning #4

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songmj86 opened this issue May 7, 2024 · 1 comment

songmj86 commented May 7, 2024

Hi

I am attempting to call the viral genes from the complete viral genomes and viral MAGs for the further annotation

This question is a little bit basic, whereas I would like to ask when I need to use single Vs meta mode for viral gene calling

Thank you !

Owner

apcamargo commented Jul 10, 2024

Sorry, I completely missed this issue!

To leverage the new models (including the ones with alternative codes) you do need to use the -p meta flag.

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