Feature/kbdev 1227 signature support

[mathieulemieux]

No description provided.

[codecov-commenter]

Codecov Report

Attention: Patch coverage is 85.91549% with 10 lines in your changes missing coverage. Please review.

Project coverage is 86.05%. Comparing base (0efbfaa) to head (cf7af4d).

Files with missing lines	Patch %	Lines
pori_python/ipr/annotate.py	46.66%	8 Missing ⚠️
pori_python/graphkb/match.py	88.88%	1 Missing ⚠️
pori_python/ipr/inputs.py	96.42%	1 Missing ⚠️

Additional details and impacted files

@@             Coverage Diff             @@
##           develop      #42      +/-   ##
===========================================
- Coverage    86.15%   86.05%   -0.10%     
===========================================
  Files           18       18              
  Lines         2196     2252      +56     
===========================================
+ Hits          1892     1938      +46     
- Misses         304      314      +10     

Flag	Coverage Δ
unittests	86.05% <85.91%> (-0.10%)	⬇️

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[elewis2]

while KBDEV-1263 is not done, what's the difference between the output from the query below and get_equivalent_terms?

[mathieulemieux]

Good point!
Based on get_terms_set(), I just assumed that all these vocab functions was only meant to be used with the Vocabulary class, but the default can actually be changed to any child class of Ontology for most of them, so I'll use get_equivalent_terms(ontology_class='Signature') here.

[mathieulemieux]

Just closed KBDEV-1263

[elewis2]

Could signatures be added to the report data for tests in test_upload? In an ideal world test_main as well but test_upload at least will not run automatically so won't hold up github actions while ipr-api prod is not yet updated

[dustinbleile]

These changes seem fine.

My only questions would be that there seem to be other similar categories like TMB_HIGH_CATEGORY. Are these signture categories something completely different or similar.