Key error

[nilsoberg2]

We are using ShortBRED on our EFI website (efi.igb.illinois.edu/efi-cgfp), and the code we have uses the diamond branch that was created over two years. DIAMOND is essential to our workflow because the BLAST option can take weeks to complete.

On this branch I consistently get key errors on line 566 of the MarkX function (process_identify.py). For example:

Finding overlap with reference database...
Traceback (most recent call last):
File "/home/groups/efi/apps/shortbred/sb_diamond_2018-08-17/shortbred_identify.py", line 361, in
dictGOICounts = pi.MarkX(dictSBFamilies,dictGOICounts)
File "/home/groups/efi/apps/shortbred/sb_diamond_2018-08-17/src/process_identify.py", line 566, in MarkX
dictOverlap[strName][i] = dictOverlap[strName][i] + 9999999
KeyError: 'A0A155BS15'

I am not sure what is causing this.