cluster.json

{
  "__default__" :
  {
    "n"      : "{threads}",
    "mem"    : "500M",
    "time"   : "10:00"
  },
  "mosaic_count_fixed" : 
  {
    "time"   : "25:00"
  },
  "mergeBams" :
  {
    "time"   : "1:30:00",
	"mem"    : "2G"
  },
  "determine_initial_strand_states" :
  {
    "time"   : "05:00"
  },
  "plot_SV_calls" :
  {
    "time"   : "8:00"
  },
  "plot_mosaic_counts" :
  {
    "time"   : "25:00"
  },
  "segmentation" :
  {
    "time"   : "45:00",
	"mem"    : "2G"
  },
  "mosaiClassifier_calc_probs" :
  {
    "mem"    : "1G",
    "time"   : "20:00"
  },
  "mosaiClassifier_make_call" :
  {
    "mem"    : "1G",
    "time"   : "25:00"
  },
  "mosaiClassifier_make_call_biallelic" :
  {
    "mem"    : "1G",
    "time"   : "25:00"
  },
  "plot_SV_calls" :
  {
    "mem"    : "2G",
    "time"   : "10:00"
  },
  "run_strandphaser_per_chrom" :
  {
    "time"   : "2:30:00",
    "mem"    : "12G"
  },
  "call_SNVs_bcftools_chrom" :
  {
    "time"  : "1:00:00",
    "mem"   : "2G"
  }
}