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dependency issue #117

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EJS01 opened this issue Oct 14, 2024 · 0 comments
Open

dependency issue #117

EJS01 opened this issue Oct 14, 2024 · 0 comments

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@EJS01
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EJS01 commented Oct 14, 2024

Hi, checkm2 team! I am encountering this one and have tried installing the dependencies already, but the error persists. Can you help me on this one?

(base) ubuntu@ubuntu-System-Product-Name:~/Documents$ conda create -n checkm2 -c bioconda -c conda-forge checkm2
Channels:
 - bioconda
 - conda-forge
 - defaults
Platform: linux-64
Collecting package metadata (repodata.json): done
Solving environment: / warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY

  • warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    warning  libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
    failed

LibMambaUnsatisfiableError: Encountered problems while solving:
  - package checkm2-1.0.1-pyh7cba7a3_0 requires tensorflow >=2.1.0,<2.6.0, but none of the providers can be installed

Could not solve for environment specs
The following package could not be installed
└─ checkm2 is not installable because it requires
   └─ tensorflow >=2.1.0,<2.6.0  but there are no viable options
      ├─ tensorflow 2.4.0 would require
      │  └─ tensorflow-base [2.4.0 py36h515a7b5_0|2.4.0 py37h00a14e9_0|2.4.0 py38h01d9eeb_0], which requires
      │     └─ grpcio 1.36.*  but there are no viable options
      │        ├─ grpcio [1.36.0|1.36.1|1.37.0|1.37.1] would require
      │        │  └─ c-ares >=1.17.1,<2.0a0 , which conflicts with any installable versions previously reported;
      │        └─ grpcio [1.36.0|1.36.1] conflicts with any installable versions previously reported;
      ├─ tensorflow [2.4.1|2.4.3] would require
      │  └─ tensorflow-base [2.4.1 py36h312d151_0|2.4.1 py37he2fe834_0|...|2.4.3 py39h23a8cbf_0], which requires
      │     └─ grpcio 1.37.* , which cannot be installed (as previously explained);
      └─ tensorflow [2.1.0|2.2.0|2.3.0|2.4.1|2.5.0] conflicts with any installable versions previously reported.
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@EJS01