.sample loading, --ld chrX het-haploid #294
Workflow file for this run
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| # Checks if the pgenlib R package can be installed by a user, | |
| # when installing pgenlibr using: | |
| # | |
| # ``` | |
| # remotes::install_github("chrchang/plink-ng/2.0/pgenlibr") | |
| # ``` | |
| # | |
| on: | |
| push: | |
| pull_request: | |
| name: can_install_pgenlib_package | |
| jobs: | |
| can_install_pgenlib_package: | |
| runs-on: ubuntu-20.04 | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| # Install R | |
| - uses: r-lib/actions/setup-r@v1 | |
| # Prequisite for using the 'remotes' R package | |
| - name: Install libcurl4-openssl-dev | |
| run: sudo apt install -qq libcurl4-openssl-dev | |
| - name: Install pgenlibr | |
| run: | | |
| install.packages("remotes") | |
| remotes::install_github("chrchang/plink-ng/2.0/pgenlibr") | |
| shell: Rscript {0} |