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DESCRIPTION
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DESCRIPTION
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Package: CNull
Type: Package
Title: Fast Algorithms for Frequency-Preserving Null Models in Ecology
Version: 1.0
Date: 2017-3-14
Authors@R: c(person("Constantinos", "Tsirogiannis", role = c("aut", "cre"),
email = "[email protected]"),
person("Adrija", "Kalvisa", role = "aut"))
Author: Constantinos Tsirogiannis [aut, cre], Adrija Kalvisa [aut]
Maintainer: Constantinos Tsirogiannis <[email protected]>
Description: Efficient computations for null models that require shuffling columns on big matrix data.
This package provides functions for faster computation of diversity measure statistics
when independent random shuffling is applied to the columns of a given matrix.
Given a diversity measure f and a matrix M, the provided functions can generate random samples
(shuffled matrix rows of M), the mean and variance of f, and the p-values of this measure
for two different null models that involve independent random shuffling of the columns of M.
The package supports computations of alpha and beta diversity measures.
License: GPL-3
Imports: Rcpp (>= 0.12.9), ape, PhyloMeasures, Matrix
LinkingTo: Rcpp
LazyLoad: yes
SystemRequirements: C++11
NeedsCompilation: yes
Packaged: 2017-03-15 15:07:39 UTC; constant
Repository: CRAN
Date/Publication: 2017-03-16 08:43:52