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Does there batch effect between the data in Tabula muris (2018 paper) and Tabula muris Senis (2020 paper)? #53

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xuxiaohan opened this issue Jul 22, 2024 · 0 comments

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@xuxiaohan
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I am working for developing batch effect correction method, and want to use your data as a case.

Here is a question. Does there existing batch effect between the datasets in Tabula muris (2018 paper) and Tabula muris Senis (2020 paper)?

I know there is batch effect between FACS and droplet data, but I wonder the datasets generated in same tech but different studies (for example, FACS) have batch effect?

Thank you a lot

Han Xu

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