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TCGA Python Tooling #1

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rbharath opened this issue Jul 15, 2017 · 0 comments
Open

TCGA Python Tooling #1

rbharath opened this issue Jul 15, 2017 · 0 comments

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@rbharath
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The Cancer Genomics Atlas (https://cancergenomole.nih.gov/) is probably the largest repository of cancer related genomics data. Adding tooling that would enable easy construction of DeepChem style deep-learning models on this data would be very useful.

Omics-pipe (https://bitbucket.org/sulab/omics_pipe) appears to be a python toolkit for interfacing with TCGA data, but doesn't appear to have been updated in the last year.

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