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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,196 @@ | ||
| """ | ||
| desispec.scripts.purge_tilenight | ||
| ================================ | ||
| """ | ||
| import argparse | ||
| from desispec.io.meta import findfile | ||
| from desispec.workflow.exptable import get_exposure_table_pathname | ||
| from desispec.workflow.proctable import get_processing_table_pathname | ||
| from desispec.workflow.tableio import load_table, write_table | ||
|
|
||
| import os | ||
| import glob | ||
| import shutil | ||
| import sys | ||
| import numpy as np | ||
| import time | ||
|
|
||
| def get_parser(): | ||
| """ | ||
| Creates an arguments parser for the desi_purge_tilenight script | ||
| """ | ||
| parser = argparse.ArgumentParser(usage = "{prog} [options]") | ||
| parser.add_argument("-n", "--night", type=int, required=True, | ||
| help="Night that the tile was observed.") | ||
| parser.add_argument("-t", "--tiles", type=str, required=True, | ||
| help="Tiles to remove from current prod. (comma separated)") | ||
| parser.add_argument("--not-dry-run", action="store_true", | ||
| help="set to actually perform action rather than print actions") | ||
| return parser | ||
|
|
||
| def remove_directory(dirname, dry_run=True): | ||
| """ | ||
| Remove the given directory from the file system | ||
| Args: | ||
| dirname, str. Full pathname to the directory you want to remove | ||
| dru_run, bool. True if you want to print actions instead of performing them. | ||
| False to actually perform them. | ||
| """ | ||
| if os.path.exists(dirname): | ||
| print(f"Identified directory {dirname} as existing.") | ||
| print(f"Dir has contents: {os.listdir(dirname)}") | ||
| if dry_run: | ||
| print(f"Dry_run set, so not performing action.") | ||
| else: | ||
| print(f"Removing: {dirname}") | ||
| shutil.rmtree(dirname) | ||
| else: | ||
| print(f"Directory {dirname} doesn't exist, so no action required.") | ||
|
|
||
| def purge_tilenight(tiles, night, dry_run=True): | ||
| """ | ||
| Removes all files assosciated with tiles on a given night. | ||
| Removes preproc files, exposures files including frames, redrock files | ||
| for perexp and pernight, and cumulative redshifts for nights on or | ||
| after the night in question. Only exposures associated with the tile | ||
| on the given night are removed, but all future cumulative redshift jobs | ||
| are also removed. | ||
| Args: | ||
| tiles, list of int. Tile to remove from current prod. | ||
| night, int. Night that tiles were observed. | ||
| dry_run, bool. If True, only prints actions it would take | ||
| Note: does not yet remove healpix redshifts touching this tile | ||
| """ | ||
| if night is None: | ||
| raise ValueError("Must specify night.") | ||
| if tiles is None: | ||
| raise ValueError("Must specify list of tiles.") | ||
|
|
||
| epathname = get_exposure_table_pathname(night=str(night), usespecprod=True) | ||
| etable = load_table(tablename=epathname, tabletype='exptable') | ||
|
|
||
| print(f'Purging night {night} tiles {tiles}') | ||
| future_cumulatives = {} | ||
| for tile in tiles: | ||
| print(f'Purging tile {tile}') | ||
| exptable = etable[etable['TILEID'] == tile] | ||
|
|
||
| ## Per exposure: remove preproc, exposure, and perexp redshift dirs | ||
| for row in exptable: | ||
| expid = int(row['EXPID']) | ||
|
|
||
| for ftype in ['preproc', 'frame']: | ||
| dirname = os.path.dirname(findfile(filetype=ftype, night=night, | ||
| expid=expid, camera='b0', | ||
| spectrograph=0, tile=tile)) | ||
| remove_directory(dirname, dry_run) | ||
|
|
||
| groupname = 'perexp' | ||
| ftype = 'redrock' | ||
| dirname = os.path.dirname(findfile(filetype=ftype, night=night, | ||
| expid=expid, camera='b0', | ||
| spectrograph=0, tile=tile, | ||
| groupname=groupname)) | ||
| remove_directory(dirname, dry_run) | ||
|
|
||
| ## Remove the pernight redshift directory if it exists | ||
| groupname = 'pernight' | ||
| ftype = 'redrock' | ||
| dirname = os.path.dirname(findfile(filetype=ftype, night=night, | ||
| camera='b0', spectrograph=0, | ||
| tile=tile, groupname=groupname)) | ||
| remove_directory(dirname, dry_run) | ||
|
|
||
| ## Look at all cumulative redshifts and remove any that would include the | ||
| ## give tile-night data (any THRUNIGHT on or after the night given) | ||
| groupname = 'cumulative' | ||
| ftype = 'redrock' | ||
| tiledirname = os.path.dirname(os.path.dirname( | ||
| findfile(filetype=ftype, night=night, camera='b0', spectrograph=0, | ||
| tile=tile, groupname=groupname))) | ||
| if os.path.exists(tiledirname): | ||
| thrunights = os.listdir(tiledirname) | ||
| for thrunight in thrunights: | ||
| thrunight_int = int(thrunight) | ||
| if thrunight_int >= night: | ||
| dirname = os.path.join(tiledirname,thrunight) | ||
| remove_directory(dirname, dry_run) | ||
| if thrunight_int > night: | ||
| if thrunight_int in future_cumulatives: | ||
| future_cumulatives[thrunight_int].append(tile) | ||
| else: | ||
| future_cumulatives[thrunight_int] = [tile] | ||
|
|
||
| ## Finally, remove any dashboard caches for the impacted nights | ||
| futurenights = sorted(list(future_cumulatives.keys())) | ||
| ## Remove expinfo and zinfo for the present night | ||
| for cachefiletype in ['expinfo', 'zinfo']: | ||
| dashcache = findfile(cachefiletype, night=night) | ||
| if os.path.exists(dashcache): | ||
| if dry_run: | ||
| print(f"Dry_run set, so not removing {dashcache}.") | ||
| else: | ||
| print(f"Removing: {dashcache}.") | ||
| os.remove(dashcache) | ||
| else: | ||
| print(f"Couldn't find {cachefiletype} file: {dashcache}") | ||
| ## Remove just zinfo for futurenights since we only purge cumulative zs | ||
| for dashnight in futurenights: | ||
| dashcache = findfile('zinfo', night=dashnight) | ||
| if os.path.exists(dashcache): | ||
| if dry_run: | ||
| print(f"Dry_run set, so not removing {dashcache}.") | ||
| else: | ||
| print(f"Removing: {dashcache}.") | ||
| os.remove(dashcache) | ||
| else: | ||
| print(f"Couldn't find {cachefiletype} file: {dashcache}") | ||
|
|
||
| ## Load old processing table | ||
| timestamp = time.strftime('%Y%m%d_%Hh%Mm%Ss') | ||
| ppathname = findfile('processing_table', night=night) | ||
| ptable = load_table(tablename=ppathname, tabletype='proctable') | ||
|
|
||
| ## Now let's remove the tiles from the processing table | ||
| keep = np.isin(ptable['TILEID'], tiles, invert=True) | ||
| print(f'Removing {len(keep) - np.sum(keep)}/{len(keep)} processing ' | ||
| + f'table entries for {night=}') | ||
| ptable = ptable[keep] | ||
|
|
||
| if dry_run: | ||
| print(f'dry_run: not changing {ppathname}') | ||
| else: | ||
| print(f'Archiving old processing table for {night=} with ' | ||
| + f'timestamp {timestamp} and saving trimmed one') | ||
| ## move old processing table out of the way | ||
| os.rename(ppathname,ppathname.replace('.csv',f".csv.{timestamp}")) | ||
| ## save new trimmed processing table | ||
| write_table(ptable,tablename=ppathname) | ||
|
|
||
| ## Now archive and modify future processing tables | ||
| for futurenight, futuretiles in future_cumulatives.items(): | ||
| ppathname = findfile('processing_table', night=futurenight) | ||
| ptable = load_table(tablename=ppathname, tabletype='proctable') | ||
|
|
||
| ## Now let's remove the tiles from the processing table | ||
| nokeep = ptable['JOBDESC'] == 'cumulative' | ||
| nokeep &= np.isin(ptable['TILEID'], futuretiles) | ||
| keep = np.bitwise_not(nokeep) | ||
| print(f'Removing {len(keep) - np.sum(keep)}/{len(keep)} processing ' | ||
| + f'table entries for night={futurenight}') | ||
| ptable = ptable[keep] | ||
|
|
||
| if dry_run: | ||
| print(f'dry_run: not changing {ppathname}') | ||
| else: | ||
| print(f'Archiving old processing table for night={futurenight} with ' | ||
| + f'timestamp {timestamp} and saving trimmed one') | ||
| ## move old processing table out of the way | ||
| os.rename(ppathname, ppathname.replace('.csv', f".csv.{timestamp}")) | ||
| ## save new trimmed processing table | ||
| write_table(ptable, tablename=ppathname) |