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72
exercises/practice/nucleotide-count/.meta/additional-tests.json
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[ | ||
{ | ||
"uuid": "3e5c30a8-87e2-4845-a815-a49671ade970", | ||
"description": "count_empty", | ||
"comments": [ | ||
"The exercise was designed with a `count` method", | ||
"which should be tested as well." | ||
], | ||
"property": "count", | ||
"input": { | ||
"nucleotide": "A", | ||
"strand": "" | ||
}, | ||
"expected": "Ok(0)" | ||
}, | ||
{ | ||
"uuid": "3e5c30a8-87e2-4845-a815-a49671ade970", | ||
"description": "count_invalid_nucleotide", | ||
"comments": [ | ||
"The exercise was designed with a `count` method", | ||
"which should be tested as well." | ||
], | ||
"property": "count", | ||
"input": { | ||
"nucleotide": "X", | ||
"strand": "A" | ||
}, | ||
"expected": "Err('X')" | ||
}, | ||
{ | ||
"uuid": "3e5c30a8-87e2-4845-a815-a49671ade970", | ||
"description": "count_invalid_dna", | ||
"comments": [ | ||
"The exercise was designed with a `count` method", | ||
"which should be tested as well." | ||
], | ||
"property": "count", | ||
"input": { | ||
"nucleotide": "A", | ||
"strand": "AX" | ||
}, | ||
"expected": "Err('X')" | ||
}, | ||
{ | ||
"uuid": "3e5c30a8-87e2-4845-a815-a49671ade970", | ||
"description": "count_repetitive_cytosine", | ||
"comments": [ | ||
"The exercise was designed with a `count` method", | ||
"which should be tested as well." | ||
], | ||
"property": "count", | ||
"input": { | ||
"nucleotide": "C", | ||
"strand": "CCCCC" | ||
}, | ||
"expected": "Ok(5)" | ||
}, | ||
{ | ||
"uuid": "3e5c30a8-87e2-4845-a815-a49671ade970", | ||
"description": "count_only_thymine", | ||
"comments": [ | ||
"The exercise was designed with a `count` method", | ||
"which should be tested as well." | ||
], | ||
"property": "count", | ||
"input": { | ||
"nucleotide": "T", | ||
"strand": "GGGGGTAACCCGG" | ||
}, | ||
"expected": "Ok(1)" | ||
} | ||
] |
39 changes: 39 additions & 0 deletions
39
exercises/practice/nucleotide-count/.meta/test_template.tera
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use std::collections::HashMap; | ||
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use nucleotide_count::*; | ||
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{% for test in cases %} | ||
{# | ||
Additional tests are appended, but we want to test the `count` API first. | ||
#} | ||
{% if test.property != "count" %} | ||
{% continue %} | ||
{% endif %} | ||
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#[test] | ||
#[ignore] | ||
fn {{ test.description | make_ident }}() { | ||
assert_eq!(count('{{ test.input.nucleotide }}', {{ test.input.strand | json_encode() }}), {{ test.expected }}); | ||
} | ||
{% endfor %} | ||
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{% for test in cases %} | ||
{% if test.property == "count" %} | ||
{% continue %} | ||
{% endif %} | ||
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#[test] | ||
#[ignore] | ||
fn {{ test.description | make_ident }}() { | ||
let output = nucleotide_counts({{ test.input.strand | json_encode() }}); | ||
{% if "error" in test.expected -%} | ||
assert!(output.is_err()); | ||
{% else -%} | ||
let mut expected = HashMap::new(); | ||
{% for key, val in test.expected -%} | ||
expected.insert('{{ key }}', {{ val }}); | ||
{% endfor -%} | ||
assert_eq!(output, Ok(expected)); | ||
{% endif -%} | ||
} | ||
{% endfor %} |
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# This is an auto-generated file. Regular comments will be removed when this | ||
# file is regenerated. Regenerating will not touch any manually added keys, | ||
# so comments can be added in a "comment" key. | ||
# This is an auto-generated file. | ||
# | ||
# Regenerating this file via `configlet sync` will: | ||
# - Recreate every `description` key/value pair | ||
# - Recreate every `reimplements` key/value pair, where they exist in problem-specifications | ||
# - Remove any `include = true` key/value pair (an omitted `include` key implies inclusion) | ||
# - Preserve any other key/value pair | ||
# | ||
# As user-added comments (using the # character) will be removed when this file | ||
# is regenerated, comments can be added via a `comment` key. | ||
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[3e5c30a8-87e2-4845-a815-a49671ade970] | ||
description = "empty strand" | ||
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[a0ea42a6-06d9-4ac6-828c-7ccaccf98fec] | ||
description = "can count one nucleotide in single-character input" | ||
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[eca0d565-ed8c-43e7-9033-6cefbf5115b5] | ||
description = "strand with repeated nucleotide" | ||
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[40a45eac-c83f-4740-901a-20b22d15a39f] | ||
description = "strand with multiple nucleotides" | ||
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[b4c47851-ee9e-4b0a-be70-a86e343bd851] | ||
description = "strand with invalid nucleotides" |
88 changes: 38 additions & 50 deletions
88
exercises/practice/nucleotide-count/tests/nucleotide-count.rs
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use nucleotide_count as dna; | ||
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use std::collections::HashMap; | ||
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fn process_nucleotidecounts_case(s: &str, pairs: &[(char, usize)]) { | ||
// The reason for the awkward code in here is to ensure that the failure | ||
// message for assert_eq! is as informative as possible. A simpler | ||
// solution would simply check the length of the map, and then | ||
// check for the presence and value of each key in the given pairs vector. | ||
let mut m: HashMap<char, usize> = dna::nucleotide_counts(s).unwrap(); | ||
for &(k, v) in pairs.iter() { | ||
assert_eq!((k, m.remove(&k)), (k, Some(v))); | ||
} | ||
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// may fail with a message that clearly shows all extra pairs in the map | ||
assert_eq!(m.iter().collect::<Vec<(&char, &usize)>>(), vec![]); | ||
} | ||
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#[test] | ||
fn count_returns_result() { | ||
assert!(dna::count('A', "").is_ok()); | ||
} | ||
use nucleotide_count::*; | ||
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#[test] | ||
#[ignore] | ||
fn count_empty() { | ||
assert_eq!(dna::count('A', ""), Ok(0)); | ||
assert_eq!(count('A', ""), Ok(0)); | ||
} | ||
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#[test] | ||
#[ignore] | ||
fn count_invalid_nucleotide() { | ||
assert_eq!(dna::count('X', "A"), Err('X')); | ||
assert_eq!(count('X', "A"), Err('X')); | ||
} | ||
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#[test] | ||
#[ignore] | ||
fn count_invalid_dna() { | ||
assert_eq!(dna::count('A', "AX"), Err('X')); | ||
assert_eq!(count('A', "AX"), Err('X')); | ||
} | ||
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#[test] | ||
#[ignore] | ||
fn count_repetitive_cytosine() { | ||
assert_eq!(dna::count('C', "CCCCC"), Ok(5)); | ||
assert_eq!(count('C', "CCCCC"), Ok(5)); | ||
} | ||
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#[test] | ||
#[ignore] | ||
fn count_only_thymine() { | ||
assert_eq!(dna::count('T', "GGGGGTAACCCGG"), Ok(1)); | ||
} | ||
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#[test] | ||
#[ignore] | ||
fn counts_returns_result() { | ||
assert!(dna::nucleotide_counts("ACGT").is_ok()); | ||
assert_eq!(count('T', "GGGGGTAACCCGG"), Ok(1)); | ||
} | ||
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#[test] | ||
#[ignore] | ||
fn empty_strand() { | ||
process_nucleotidecounts_case("", &[('A', 0), ('T', 0), ('C', 0), ('G', 0)]); | ||
let output = nucleotide_counts(""); | ||
let mut expected = HashMap::new(); | ||
expected.insert('A', 0); | ||
expected.insert('C', 0); | ||
expected.insert('G', 0); | ||
expected.insert('T', 0); | ||
assert_eq!(output, Ok(expected)); | ||
} | ||
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#[test] | ||
#[ignore] | ||
/// can count one nucleotide in single-character input | ||
fn can_count_one_nucleotide_in_singlecharacter_input() { | ||
process_nucleotidecounts_case("G", &[('A', 0), ('C', 0), ('G', 1), ('T', 0)]); | ||
fn can_count_one_nucleotide_in_single_character_input() { | ||
let output = nucleotide_counts("G"); | ||
let mut expected = HashMap::new(); | ||
expected.insert('A', 0); | ||
expected.insert('C', 0); | ||
expected.insert('G', 1); | ||
expected.insert('T', 0); | ||
assert_eq!(output, Ok(expected)); | ||
} | ||
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#[test] | ||
#[ignore] | ||
fn strand_with_repeated_nucleotide() { | ||
process_nucleotidecounts_case("GGGGGGG", &[('A', 0), ('T', 0), ('C', 0), ('G', 7)]); | ||
let output = nucleotide_counts("GGGGGGG"); | ||
let mut expected = HashMap::new(); | ||
expected.insert('A', 0); | ||
expected.insert('C', 0); | ||
expected.insert('G', 7); | ||
expected.insert('T', 0); | ||
assert_eq!(output, Ok(expected)); | ||
} | ||
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#[test] | ||
#[ignore] | ||
/// strand with multiple nucleotides | ||
fn strand_with_multiple_nucleotides() { | ||
process_nucleotidecounts_case( | ||
"AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGC", | ||
&[('A', 20), ('T', 21), ('C', 12), ('G', 17)], | ||
); | ||
} | ||
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#[test] | ||
#[ignore] | ||
fn counts_invalid_nucleotide_results_in_err() { | ||
assert_eq!(dna::nucleotide_counts("GGXXX"), Err('X')); | ||
let output = | ||
nucleotide_counts("AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGC"); | ||
let mut expected = HashMap::new(); | ||
expected.insert('A', 20); | ||
expected.insert('C', 12); | ||
expected.insert('G', 17); | ||
expected.insert('T', 21); | ||
assert_eq!(output, Ok(expected)); | ||
} | ||
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#[test] | ||
#[ignore] | ||
/// strand with invalid nucleotides | ||
fn strand_with_invalid_nucleotides() { | ||
assert_eq!(dna::nucleotide_counts("AGXXACT"), Err('X'),); | ||
let output = nucleotide_counts("AGXXACT"); | ||
assert!(output.is_err()); | ||
} |