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up tutorial
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fconstancias committed Apr 13, 2022
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5 changes: 3 additions & 2 deletions SOP/community_analyses/Microbiome_R_tutorial.Rmd
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Expand Up @@ -59,7 +59,7 @@ Install R/ Rstudio from the ETH AppV Kiosk or following the instructions [here](

### MAC:

Mac: Install Xcode from the Mac App Store.
macOS users - might need to install xquartz for some of the function (to do this with homebrew, run the following command in your mac’s Terminal: `brew install --cask xquartz`)

```{r, eval=FALSE}
#devtools
Expand All @@ -78,7 +78,8 @@ BiocManager::install("phyloseq")

### Windows:

Windows: Install [Rtools](https://cran.r-project.org/bin/windows/Rtools/)
Windows users - will need to have RTools installed so that your computer can build this package. Follow instructions [here](http://jtleek.com/modules/01_DataScientistToolbox/02_10_rtools/).

```{r, eval=FALSE}
# devtools
install.packages("devtools")
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