diff --git a/lib/galaxy/version.py b/lib/galaxy/version.py index 23d4149e5abc..e753e89d4972 100644 --- a/lib/galaxy/version.py +++ b/lib/galaxy/version.py @@ -1,3 +1,3 @@ VERSION_MAJOR = "23.0" -VERSION_MINOR = "4.dev0" +VERSION_MINOR = "4" VERSION = VERSION_MAJOR + (f".{VERSION_MINOR}" if VERSION_MINOR else "") diff --git a/packages/app/HISTORY.rst b/packages/app/HISTORY.rst index a0c1e8f0cbe4..5c1e7af3a162 100644 --- a/packages/app/HISTORY.rst +++ b/packages/app/HISTORY.rst @@ -3,11 +3,17 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ +------------------- +23.0.4 (2023-06-30) +------------------- + +========= +Bug fixes +========= +* Fix default when statement evaluation by `@mvdbeek `_ in `#16332 `_ +* Redact private role name and description when purging user by `@mvdbeek `_ in `#16349 `_ ------------------- 23.0.3 (2023-06-26) @@ -41,12 +47,14 @@ Other changes Bug fixes ========= +* * Fix ``Text File Busy`` errors at the source by `@mvdbeek `_ in `#16212 `_ ============ Enhancements ============ +* * Point release deps fixes and docs by `@mvdbeek `_ in `#16214 `_ * Use galaxy-release-util to upload python packages by `@mvdbeek `_ in `#16240 `_ @@ -59,6 +67,7 @@ Enhancements Bug fixes ========= +* * * Display DCE in job parameter component, allow rerunning with DCE input by `@mvdbeek `_ in `#15744 `_ * Fix mixed outputs_to_working_directory pulsar destinations by `@mvdbeek `_ in `#15927 `_ @@ -83,6 +92,7 @@ Bug fixes Other changes ============= +* * Startup fix when tool removed between reboot by `@mvdbeek `_ in `#16175 `_ ------------------- diff --git a/packages/app/setup.cfg b/packages/app/setup.cfg index 0505bfaf21f3..b9b6d0b73800 100644 --- a/packages/app/setup.cfg +++ b/packages/app/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-app url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True @@ -84,4 +84,4 @@ console_scripts = [options.packages.find] exclude = galaxy.tools.bundled* - tests* + tests* \ No newline at end of file diff --git a/packages/auth/HISTORY.rst b/packages/auth/HISTORY.rst index 0a305e196f35..873aa4267c55 100644 --- a/packages/auth/HISTORY.rst +++ b/packages/auth/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/auth/setup.cfg b/packages/auth/setup.cfg index ba17fa5dabd0..1346bad17b89 100644 --- a/packages/auth/setup.cfg +++ b/packages/auth/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-auth url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/config/HISTORY.rst b/packages/config/HISTORY.rst index b38ccf077f82..157973361e69 100644 --- a/packages/config/HISTORY.rst +++ b/packages/config/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/config/setup.cfg b/packages/config/setup.cfg index fd2f0ab829c6..41641c696b85 100644 --- a/packages/config/setup.cfg +++ b/packages/config/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-config url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/data/HISTORY.rst b/packages/data/HISTORY.rst index 2b488d8b305a..f444d5644c73 100644 --- a/packages/data/HISTORY.rst +++ b/packages/data/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/data/setup.cfg b/packages/data/setup.cfg index 4b1f021158b7..f338c01a9d5f 100644 --- a/packages/data/setup.cfg +++ b/packages/data/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-data url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True @@ -68,4 +68,4 @@ console_scripts = [options.packages.find] exclude = - tests* + tests* \ No newline at end of file diff --git a/packages/files/HISTORY.rst b/packages/files/HISTORY.rst index babbb55114ac..b8ebef5b1c60 100644 --- a/packages/files/HISTORY.rst +++ b/packages/files/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/files/setup.cfg b/packages/files/setup.cfg index fb83147b2a4b..15938fbeb079 100644 --- a/packages/files/setup.cfg +++ b/packages/files/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-files url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/job_execution/HISTORY.rst b/packages/job_execution/HISTORY.rst index 0a305e196f35..873aa4267c55 100644 --- a/packages/job_execution/HISTORY.rst +++ b/packages/job_execution/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/job_execution/setup.cfg b/packages/job_execution/setup.cfg index 363490eae0af..045dda63a338 100644 --- a/packages/job_execution/setup.cfg +++ b/packages/job_execution/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-job-execution url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/job_metrics/HISTORY.rst b/packages/job_metrics/HISTORY.rst index eee9ccaa4e01..1dad09aaa5f0 100644 --- a/packages/job_metrics/HISTORY.rst +++ b/packages/job_metrics/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/job_metrics/setup.cfg b/packages/job_metrics/setup.cfg index 1125a3a45510..44107e798fe9 100644 --- a/packages/job_metrics/setup.cfg +++ b/packages/job_metrics/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-job-metrics url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/navigation/HISTORY.rst b/packages/navigation/HISTORY.rst index 251fa917474d..8512a2a123ce 100644 --- a/packages/navigation/HISTORY.rst +++ b/packages/navigation/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/navigation/setup.cfg b/packages/navigation/setup.cfg index b55099f2413e..6349ce82313d 100644 --- a/packages/navigation/setup.cfg +++ b/packages/navigation/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-navigation url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/objectstore/HISTORY.rst b/packages/objectstore/HISTORY.rst index 1964bec66660..fc18168f73fd 100644 --- a/packages/objectstore/HISTORY.rst +++ b/packages/objectstore/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/objectstore/setup.cfg b/packages/objectstore/setup.cfg index 801a57ec44e8..86cb31f1d601 100644 --- a/packages/objectstore/setup.cfg +++ b/packages/objectstore/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-objectstore url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/selenium/HISTORY.rst b/packages/selenium/HISTORY.rst index dc3ba2c92942..dac80e1df9e6 100644 --- a/packages/selenium/HISTORY.rst +++ b/packages/selenium/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) @@ -35,6 +35,7 @@ Enhancements Enhancements ============ +* * * Add support for launching workflows via Tutorial Mode by `@hexylena `_ in `#15684 `_ diff --git a/packages/selenium/setup.cfg b/packages/selenium/setup.cfg index 9ceb973a6a8d..60e9886a07fd 100644 --- a/packages/selenium/setup.cfg +++ b/packages/selenium/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-selenium url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/test_api/HISTORY.rst b/packages/test_api/HISTORY.rst index c117e0f231b1..a2c71ac6fcc4 100644 --- a/packages/test_api/HISTORY.rst +++ b/packages/test_api/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/test_api/setup.cfg b/packages/test_api/setup.cfg index ead5c951fb30..0d79d904e2c6 100644 --- a/packages/test_api/setup.cfg +++ b/packages/test_api/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-test-api url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/test_base/HISTORY.rst b/packages/test_base/HISTORY.rst index 5eca52a2baff..8dfbab6062fc 100644 --- a/packages/test_base/HISTORY.rst +++ b/packages/test_base/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/test_base/setup.cfg b/packages/test_base/setup.cfg index e73398e31707..05003fb46f24 100644 --- a/packages/test_base/setup.cfg +++ b/packages/test_base/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-test-base url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/test_driver/HISTORY.rst b/packages/test_driver/HISTORY.rst index 0a305e196f35..873aa4267c55 100644 --- a/packages/test_driver/HISTORY.rst +++ b/packages/test_driver/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/test_driver/setup.cfg b/packages/test_driver/setup.cfg index 73a8a6741629..8fc871b02e00 100644 --- a/packages/test_driver/setup.cfg +++ b/packages/test_driver/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-test-driver url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/tool_util/HISTORY.rst b/packages/tool_util/HISTORY.rst index 0f0e655bc983..08792512290a 100644 --- a/packages/tool_util/HISTORY.rst +++ b/packages/tool_util/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) @@ -36,6 +36,7 @@ Enhancements Bug fixes ========= +* * Don't fail CWL tool parsing when Cheetah not installed by `@mvdbeek `_ in `#16219 `_ * Allow skipping ``expect_num_outputs`` when ``expect_failure`` is set in tool test by `@bernt-matthias `_ in `#16237 `_ @@ -48,6 +49,7 @@ Bug fixes Bug fixes ========= +* * * Fix assertion linting to not fail on byte suffixes by `@bernt-matthias `_ in `#15873 `_ * Fix ``get_test_from_anaconda()`` and ``base_image_for_targets()`` functions by `@nsoranzo `_ in `#16125 `_ @@ -57,6 +59,7 @@ Bug fixes Enhancements ============ +* * Allow setting auto_decompress property in staging interface by `@mvdbeek `_ in `#16014 `_ ------------------- diff --git a/packages/tool_util/setup.cfg b/packages/tool_util/setup.cfg index 3902bf2c6be3..a1dd6e05c9fa 100644 --- a/packages/tool_util/setup.cfg +++ b/packages/tool_util/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-tool-util url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True @@ -68,4 +68,4 @@ edam = [options.packages.find] exclude = - tests* + tests* \ No newline at end of file diff --git a/packages/tours/HISTORY.rst b/packages/tours/HISTORY.rst index 251fa917474d..8512a2a123ce 100644 --- a/packages/tours/HISTORY.rst +++ b/packages/tours/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/tours/setup.cfg b/packages/tours/setup.cfg index aad582f3c79b..14de5f21c4e9 100644 --- a/packages/tours/setup.cfg +++ b/packages/tours/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-tours url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True @@ -44,4 +44,4 @@ console_scripts = [options.packages.find] exclude = - tests* + tests* \ No newline at end of file diff --git a/packages/util/HISTORY.rst b/packages/util/HISTORY.rst index 490f7edb97c0..8684bf14b015 100644 --- a/packages/util/HISTORY.rst +++ b/packages/util/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/util/setup.cfg b/packages/util/setup.cfg index 011fd92cb200..29334263ce09 100644 --- a/packages/util/setup.cfg +++ b/packages/util/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-util url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True diff --git a/packages/web_apps/HISTORY.rst b/packages/web_apps/HISTORY.rst index 629ffa45adc9..cdc0e22ad421 100644 --- a/packages/web_apps/HISTORY.rst +++ b/packages/web_apps/HISTORY.rst @@ -3,11 +3,16 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ +------------------- +23.0.4 (2023-06-30) +------------------- + +========= +Bug fixes +========= +* Fix folder access for anonymous user by `@mvdbeek `_ in `#16330 `_ ------------------- 23.0.3 (2023-06-26) @@ -41,6 +46,7 @@ No recorded changes since last release Bug fixes ========= +* * Display DCE in job parameter component, allow rerunning with DCE input by `@mvdbeek `_ in `#15744 `_ * Various fixes to path prefix handling by `@mvdbeek `_ in `#16033 `_ * Fix dataype_change not updating HDCA update_time by `@mvdbeek `_ in `#16099 `_ diff --git a/packages/web_apps/setup.cfg b/packages/web_apps/setup.cfg index c67f3da6c606..eb204db0f342 100644 --- a/packages/web_apps/setup.cfg +++ b/packages/web_apps/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-web-apps url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True @@ -74,4 +74,4 @@ python_requires = >=3.7 [options.packages.find] exclude = tests* - tool_shed.test* + tool_shed.test* \ No newline at end of file diff --git a/packages/web_framework/HISTORY.rst b/packages/web_framework/HISTORY.rst index 8c2f80f738f7..4407e79403e0 100644 --- a/packages/web_framework/HISTORY.rst +++ b/packages/web_framework/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/web_framework/setup.cfg b/packages/web_framework/setup.cfg index 02ef6a823a96..631fba451d01 100644 --- a/packages/web_framework/setup.cfg +++ b/packages/web_framework/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-web-framework url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True @@ -49,4 +49,4 @@ python_requires = >=3.7 [options.packages.find] exclude = - tests* + tests* \ No newline at end of file diff --git a/packages/web_stack/HISTORY.rst b/packages/web_stack/HISTORY.rst index 18cf9cecd2c7..e5abe7d88d0f 100644 --- a/packages/web_stack/HISTORY.rst +++ b/packages/web_stack/HISTORY.rst @@ -3,11 +3,11 @@ History .. to_doc ------------ -23.0.4.dev0 ------------ - +------------------- +23.0.4 (2023-06-30) +------------------- +No recorded changes since last release ------------------- 23.0.3 (2023-06-26) diff --git a/packages/web_stack/setup.cfg b/packages/web_stack/setup.cfg index c889ab3542a6..e5c07bb6609e 100644 --- a/packages/web_stack/setup.cfg +++ b/packages/web_stack/setup.cfg @@ -27,7 +27,7 @@ long_description = file: README.rst, HISTORY.rst long_description_content_type = text/x-rst name = galaxy-web-stack url = https://github.com/galaxyproject/galaxy -version = 23.0.4.dev0 +version = 23.0.4 [options] include_package_data = True