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Issue running txss.hmm models with hmmer #5

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lbry77 opened this issue Jun 3, 2022 · 1 comment
Open

Issue running txss.hmm models with hmmer #5

lbry77 opened this issue Jun 3, 2022 · 1 comment

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@lbry77
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lbry77 commented Jun 3, 2022

I want use your hmm with hmmer, for conj.hmm models there is no problem but with txss.hmm models hmmer can't use models.
For use hmmer, I must concatenate models with :
cat *.hmm > macsyfinder_txss
it works, then I must compress and index with :
hmmpress macsyfinder_txss
but it returns an error :
Working... bad file format in HMM file macsyfinder_txss

If you can check your txss models for this issue, it would be very nice. Thank you.

@rdenise
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rdenise commented Jun 15, 2022

Hi,
Did you tried the hmm profiles that can be found on the new repository for the macsy-model: https://github.com/macsy-models/TXSS

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