log4j2.xml

<?xml version="1.0" encoding="UTF-8"?>
<Configuration status="WARN" name="XMLConfigTest" packages="org.sbml.*">
  <Properties>
    <Property name="filename">jsbml.log</Property>
  </Properties>
  <ThresholdFilter level="trace"/>
 
  <Appenders>
    <Console name="console">
      <PatternLayout pattern="%5p (%F:%L) - %m%n"/>
    </Console>
    <File name="file" fileName="${filename}">
      <PatternLayout>
        <pattern>%d %p %C{1.} [%t] %m%n</pattern>
      </PatternLayout>
    </File>
  </Appenders>
 
  <Loggers>
    <Logger name="org.sbml" level="info" additivity="false">
      <AppenderRef ref="console"/>
      <AppenderRef ref="file"/>
    </Logger>

<!--
    <Logger name="org.sbml.jsbml.xml.stax.SBMLWriter" level="debug" additivity="false">
      <AppenderRef ref="console"/>
      <AppenderRef ref="file"/>      
    </Logger>
    
    <Logger name="org.sbml.jsbml.xml.stax.SBMLReader" level="debug" additivity="false">
      <AppenderRef ref="console"/>
      <AppenderRef ref="file"/>      
    </Logger>
-->
<!--    
# org.sbml.jsbml.test.SimpleSBaseChangeListener - DEBUG : it will display all add, remove or change event (lot of output when reading an SBML file)
# org.sbml.jsbml.xml.parsers.SBMLCoreParser - ERROR to DEBUG : anything related to problems when parsing the SBML core elements.
# org.sbml.jsbml.xml.parsers.StringParser - ERROR to DEBUG : (lot of output) display all the event when reading XHTML
# org.sbml.jsbml.xml.parsers.AnnotationParser - DEBUG : output when reading non RDF annotations.
# org.sbml.jsbml.xml.parsers.XMLNodeWriter - DEBUG : output events when writing XMLNode, so HTML block
# org.sbml.jsbml.xml.stax.SBMLReader - ERROR to DEBUG : (lot of output) display all the event when reading an SBML file
# org.sbml.jsbml.xml.stax.SBMLWriter - ERROR to DEBUG : (lot of output) display all the event when writing an SBML file
# org.sbml.jsbml.util.StringTools - WARN : warning when there is a problem with the conversion of a String into a number or boolean.
# org.sbml.jsbml.util.compilers.MathMLXMLStreamCompiler - WARN to DEBUG : (lot of output) display all the event when writing mathML
# org.sbml.jsbml.xml.parsers.MathMLStaxParser - ERROR to DEBUG : (lot of output) display all the event when reading a MathML block
# org.sbml.jsbml.SBMLDocument - ERROR to DEBUG : will display problems related to the checkConsistency call
# org.sbml.jsbml.validator.SBMLValidator - DEBUG : will print the xml result file from http://sbml.org/validator/ with few others checks when the parsing is done
# org.sbml.jsbml.util.SubModel - DEBUG : will print the details of the submodel building
# org.sbml.jsbml.ASTNode - ERROR to DEBUG
# org.sbml.jsbml.xml.parsers.AbstractReaderWriter - DEBUG : events when reading or writing L3 packages block (if the parser extends this abstract class)
# org.sbml.jsbml.xml.parsers.QualParser - DEBUG : events when reading/writing the qual package/extension.
# org.sbml.jsbml.ext.comp.CompModelPlugin - DEBUG: register and unregister debug output for the comp package id namespace
# org.sbml.jsbml.ext.comp.ArraysSBasePlugin - DEBUG: register and unregister debug output for the arrays package id namespace
# org.sbml.jsbml.Model - DEBUG: register and unregister debug output for the core package id namespace
# org.sbml.jsbml.xml.parsers.SBMLRDFAnnotationParser - DEBUG: debug output when reading and writing RDF annotations

    
--> 
    <Root level="info">
      <AppenderRef ref="file"/>
    </Root>
  </Loggers>
 
</Configuration>