From e9730d2aa462a16a83f3e84edd063be6c8fe894d Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Wed, 22 Jun 2022 03:56:13 +0000
Subject: [PATCH] Bump numpy from 1.19.1 to 1.22.0

Bumps [numpy](https://github.com/numpy/numpy) from 1.19.1 to 1.22.0.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/HOWTO_RELEASE.rst)
- [Commits](https://github.com/numpy/numpy/compare/v1.19.1...v1.22.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 Pipfile.lock | 1180 +++++++++++++++++++++++++++++++-------------------
 1 file changed, 739 insertions(+), 441 deletions(-)

diff --git a/Pipfile.lock b/Pipfile.lock
index 617c985..d05abb8 100644
--- a/Pipfile.lock
+++ b/Pipfile.lock
@@ -18,11 +18,11 @@
     "default": {
         "attrs": {
             "hashes": [
-                "sha256:08a96c641c3a74e44eb59afb61a24f2cb9f4d7188748e76ba4bb5edfa3cb7d1c",
-                "sha256:f7b7ce16570fe9965acd6d30101a28f62fb4a7f9e926b3bbc9b61f8b04247e72"
+                "sha256:2d27e3784d7a565d36ab851fe94887c5eccd6a463168875832a1be79c82828b4",
+                "sha256:626ba8234211db98e869df76230a137c4c40a12d72445c45d5f5b716f076e2fd"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==19.3.0"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==21.4.0"
         },
         "backports-datetime-fromisoformat": {
             "hashes": [
@@ -33,10 +33,11 @@
         },
         "certifi": {
             "hashes": [
-                "sha256:5930595817496dd21bb8dc35dad090f1c2cd0adfaf21204bf6732ca5d8ee34d3",
-                "sha256:8fc0819f1f30ba15bdb34cceffb9ef04d99f420f68eb75d901e9560b8749fc41"
+                "sha256:84c85a9078b11105f04f3036a9482ae10e4621616db313fe045dd24743a0820d",
+                "sha256:fe86415d55e84719d75f8b69414f6438ac3547d2078ab91b67e779ef69378412"
             ],
-            "version": "==2020.6.20"
+            "markers": "python_version >= '3.6'",
+            "version": "==2022.6.15"
         },
         "chardet": {
             "hashes": [
@@ -55,10 +56,11 @@
         },
         "decorator": {
             "hashes": [
-                "sha256:41fa54c2a0cc4ba648be4fd43cff00aedf5b9465c9bf18d64325bc225f08f760",
-                "sha256:e3a62f0520172440ca0dcc823749319382e377f37f140a0b99ef45fecb84bfe7"
+                "sha256:637996211036b6385ef91435e4fae22989472f9d571faba8927ba8253acbc330",
+                "sha256:b8c3f85900b9dc423225913c5aace94729fe1fa9763b38939a95226f02d37186"
             ],
-            "version": "==4.4.2"
+            "markers": "python_version >= '3.5'",
+            "version": "==5.1.1"
         },
         "deprecation": {
             "hashes": [
@@ -78,18 +80,18 @@
         },
         "iniconfig": {
             "hashes": [
-                "sha256:80cf40c597eb564e86346103f609d74efce0f6b4d4f30ec8ce9e2c26411ba437",
-                "sha256:e5f92f89355a67de0595932a6c6c02ab4afddc6fcdc0bfc5becd0d60884d3f69"
+                "sha256:011e24c64b7f47f6ebd835bb12a743f2fbe9a26d4cecaa7f53bc4f35ee9da8b3",
+                "sha256:bc3af051d7d14b2ee5ef9969666def0cd1a000e121eaea580d4a313df4b37f32"
             ],
-            "version": "==1.0.1"
+            "version": "==1.1.1"
         },
         "more-itertools": {
             "hashes": [
-                "sha256:68c70cc7167bdf5c7c9d8f6954a7837089c6a36bf565383919bb595efb8a17e5",
-                "sha256:b78134b2063dd214000685165d81c154522c3ee0a1c0d4d113c80361c234c5a2"
+                "sha256:a42901a0a5b169d925f6f217cd5a190e32ef54360905b9c39ee7db5313bfec0f",
+                "sha256:c5122bffc5f104d37c1626b8615b511f3427aa5389b94d61e5ef8236bfbc3ddb"
             ],
             "markers": "python_version >= '3.5'",
-            "version": "==8.4.0"
+            "version": "==8.13.0"
         },
         "networkx": {
             "hashes": [
@@ -101,35 +103,31 @@
         },
         "numpy": {
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+                "sha256:b55b953a1bdb465f4dc181758570d321db4ac23005f90ffd2b434cc6609a63dd",
+                "sha256:bb02929b0d6bfab4c48a79bd805bd7419114606947ec8284476167415171f55b",
+                "sha256:bece0a4a49e60e472a6d1f70ac6cdea00f9ab80ff01132f96bd970cdd8a9e5a9",
+                "sha256:e41e8951749c4b5c9a2dc5fdbc1a4eec6ab2a140fdae9b460b0f557eed870f4d",
+                "sha256:f71d57cc8645f14816ae249407d309be250ad8de93ef61d9709b45a0ddf4050c"
             ],
-            "markers": "python_version >= '3.6'",
-            "version": "==1.19.1"
+            "index": "pypi",
+            "version": "==1.22.0"
         },
         "obonet": {
             "hashes": [
@@ -140,11 +138,11 @@
         },
         "packaging": {
             "hashes": [
-                "sha256:4357f74f47b9c12db93624a82154e9b120fa8293699949152b22065d556079f8",
-                "sha256:998416ba6962ae7fbd6596850b80e17859a5753ba17c32284f67bfff33784181"
+                "sha256:dd47c42927d89ab911e606518907cc2d3a1f38bbd026385970643f9c5b8ecfeb",
+                "sha256:ef103e05f519cdc783ae24ea4e2e0f508a9c99b2d4969652eed6a2e1ea5bd522"
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-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==20.4"
+            "markers": "python_version >= '3.6'",
+            "version": "==21.3"
         },
         "pandas": {
             "hashes": [
@@ -178,19 +176,19 @@
         },
         "py": {
             "hashes": [
-                "sha256:366389d1db726cd2fcfc79732e75410e5fe4d31db13692115529d34069a043c2",
-                "sha256:9ca6883ce56b4e8da7e79ac18787889fa5206c79dcc67fb065376cd2fe03f342"
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-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==1.9.0"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==1.11.0"
         },
         "pyparsing": {
             "hashes": [
-                "sha256:c203ec8783bf771a155b207279b9bccb8dea02d8f0c9e5f8ead507bc3246ecc1",
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+                "sha256:2b020ecf7d21b687f219b71ecad3631f644a47f01403fa1d1036b0c6416d70fb",
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-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==2.4.7"
+            "markers": "python_full_version >= '3.6.8'",
+            "version": "==3.0.9"
         },
         "pytest": {
             "hashes": [
@@ -202,18 +200,18 @@
         },
         "python-dateutil": {
             "hashes": [
-                "sha256:73ebfe9dbf22e832286dafa60473e4cd239f8592f699aa5adaf10050e6e1823c",
-                "sha256:75bb3f31ea686f1197762692a9ee6a7550b59fc6ca3a1f4b5d7e32fb98e2da2a"
+                "sha256:0123cacc1627ae19ddf3c27a5de5bd67ee4586fbdd6440d9748f8abb483d3e86",
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             ],
             "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==2.8.1"
+            "version": "==2.8.2"
         },
         "pytz": {
             "hashes": [
-                "sha256:a494d53b6d39c3c6e44c3bec237336e14305e4f29bbf800b599253057fbb79ed",
-                "sha256:c35965d010ce31b23eeb663ed3cc8c906275d6be1a34393a1d73a41febf4a048"
+                "sha256:1e760e2fe6a8163bc0b3d9a19c4f84342afa0a2affebfaa84b01b978a02ecaa7",
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             ],
-            "version": "==2020.1"
+            "version": "==2022.1"
         },
         "requests": {
             "hashes": [
@@ -225,26 +223,27 @@
         },
         "six": {
             "hashes": [
-                "sha256:30639c035cdb23534cd4aa2dd52c3bf48f06e5f4a941509c8bafd8ce11080259",
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             "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==1.15.0"
+            "version": "==1.16.0"
         },
         "toml": {
             "hashes": [
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+                "sha256:b3bda1d108d5dd99f4a20d24d9c348e91c4db7ab1b749200bded2f839ccbe68f"
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-            "version": "==0.10.1"
+            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'",
+            "version": "==0.10.2"
         },
         "urllib3": {
             "hashes": [
-                "sha256:91056c15fa70756691db97756772bb1eb9678fa585d9184f24534b100dc60f4a",
-                "sha256:e7983572181f5e1522d9c98453462384ee92a0be7fac5f1413a1e35c56cc0461"
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             "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4' and python_version < '4'",
-            "version": "==1.25.10"
+            "version": "==1.25.11"
         }
     },
     "develop": {
@@ -255,29 +254,28 @@
             ],
             "version": "==0.7.12"
         },
-        "appnope": {
+        "asttokens": {
             "hashes": [
-                "sha256:5b26757dc6f79a3b7dc9fab95359328d5747fcb2409d331ea66d0272b90ab2a0",
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-            "markers": "sys_platform == 'darwin' and platform_system == 'Darwin'",
-            "version": "==0.1.0"
+            "version": "==2.0.5"
         },
         "attrs": {
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-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==19.3.0"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==21.4.0"
         },
         "babel": {
             "hashes": [
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-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==2.8.0"
+            "markers": "python_version >= '3.6'",
+            "version": "==2.10.3"
         },
         "backcall": {
             "hashes": [
@@ -295,25 +293,27 @@
         },
         "bleach": {
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-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
-            "version": "==3.1.5"
+            "markers": "python_version >= '3.7'",
+            "version": "==5.0.0"
         },
         "certifi": {
             "hashes": [
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@@ -399,19 +432,33 @@
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@@ -423,34 +470,42 @@
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@@ -461,33 +516,34 @@
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@@ -617,6 +712,14 @@
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@@ -624,14 +727,6 @@
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@@ -642,11 +737,19 @@
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@@ -705,11 +804,11 @@
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@@ -735,17 +834,19 @@
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@@ -772,68 +873,149 @@
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@@ -946,27 +1182,39 @@
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@@ -981,7 +1229,7 @@
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+                "sha256:fba85b6cd9c39be262fcd23865652920832b61583de2a2ca907dbd8e8a8c81e5"
+            ],
+            "markers": "python_full_version >= '3.5.0'",
+            "version": "==6.1"
         },
         "traitlets": {
             "hashes": [
-                "sha256:70b4c6a1d9019d7b4f6846832288f86998aa3b9207c6821f3578a6a6a467fe44",
-                "sha256:d023ee369ddd2763310e4c3eae1ff649689440d4ae59d7485eb4cfbbe3e359f7"
+                "sha256:0bb9f1f9f017aa8ec187d8b1b2a7a6626a2a1d877116baba52a129bfa124f8e2",
+                "sha256:65fa18961659635933100db8ca120ef6220555286949774b9cfc106f941d1c7a"
             ],
-            "version": "==4.3.3"
+            "markers": "python_version >= '3.7'",
+            "version": "==5.3.0"
         },
         "urllib3": {
             "hashes": [
-                "sha256:91056c15fa70756691db97756772bb1eb9678fa585d9184f24534b100dc60f4a",
-                "sha256:e7983572181f5e1522d9c98453462384ee92a0be7fac5f1413a1e35c56cc0461"
+                "sha256:8d7eaa5a82a1cac232164990f04874c594c9453ec55eef02eab885aa02fc17a2",
+                "sha256:f5321fbe4bf3fefa0efd0bfe7fb14e90909eb62a48ccda331726b4319897dd5e"
             ],
             "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4' and python_version < '4'",
-            "version": "==1.25.10"
+            "version": "==1.25.11"
         },
         "vcfpy": {
             "hashes": [
-                "sha256:7213602c4e68d7db5947d43e232d825d4c2cfa72c3f4c1a1f8c1ba2f67280159"
+                "sha256:9bad8728e13ebbea9b0d5bb5daf76ddaeb41d7f5e2e71c0834dc25e7bb3be4cb"
             ],
-            "version": "==0.13.0"
+            "version": "==0.13.4"
         },
         "wcwidth": {
             "hashes": [
@@ -1114,10 +1404,18 @@
         },
         "widgetsnbextension": {
             "hashes": [
-                "sha256:079f87d87270bce047512400efd70238820751a11d2d8cb137a5a5bdbaf255c7",
-                "sha256:bd314f8ceb488571a5ffea6cc5b9fc6cba0adaf88a9d2386b93a489751938bcd"
+                "sha256:4fd321cad39fdcf8a8e248a657202d42917ada8e8ed5dd3f60f073e0d54ceabd",
+                "sha256:e84a7a9fcb9baf3d57106e184a7389a8f8eb935bf741a5eb9d60aa18cc029a80"
+            ],
+            "version": "==3.6.0"
+        },
+        "zipp": {
+            "hashes": [
+                "sha256:56bf8aadb83c24db6c4b577e13de374ccfb67da2078beba1d037c17980bf43ad",
+                "sha256:c4f6e5bbf48e74f7a38e7cc5b0480ff42b0ae5178957d564d18932525d5cf099"
             ],
-            "version": "==3.5.1"
+            "markers": "python_version < '3.10'",
+            "version": "==3.8.0"
         }
     }
 }