adding some test script. it is still preliminary and needs to be updated later

Author: Naozumi Hiranuma

test.sh

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+#python DeepAccNet.py -r --verbose samples test/outputs1
+#python DeepAccNet.py -r -e --verbose samples test/outputs2
+#python extractBert.py samples test/outputs3
+#python DeepAccNet.py -r --bert --verbose samples test/outputs3
+#python extractBert.py samples test/outputs4
+#python DeepAccNet.py -r --bert -e --verbose samples test/outputs4
+#python DeepAccNet.py -r --verbose --csv samples test/outputs1.csv
+#python extractBert.py samples samples
+#python DeepAccNet.py -r --bert --verbose --csv samples test/outputs2.csv
+#python DeepAccNet.py -r --verbose --pdb samples/tag0137.relaxed.al.pdb test/output1.npz
+python DeepAccNet-noPyRosetta.py -r --verbose samples test/outputs5
+python DeepAccNet-noPyRosetta.py -r -e --verbose samples test/outputs6
+python extractBert.py samples test/outputs7
+python DeepAccNet-noPyRosetta.py -r --bert --verbose samples test/outputs7
+python extractBert.py samples test/outputs8
+python DeepAccNet-noPyRosetta.py -r --bert -e --verbose samples test/outputs8

test/Check.ipynb

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+sample	cb-lddt
+tag0137.relaxed.al	0.3340
+tag0177.relaxed.al	0.3332
+tag0172.relaxed.al	0.3316

test/output1.npz

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+sample	cb-lddt
+tag0137.relaxed.al	0.3196
+tag0177.relaxed.al	0.3317
+tag0172.relaxed.al	0.3340