-
Notifications
You must be signed in to change notification settings - Fork 27
230 lines (169 loc) · 7.54 KB
/
h5bench-hdf5-1.10.4.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
name: h5bench (HDF5 1.10.4)
on:
pull_request:
workflow_dispatch:
push:
branches:
- master
jobs:
h5bench:
runs-on: ubuntu-20.04
container:
image: hpcio/hdf5-1.10.4
timeout-minutes: 60
env:
OMPI_ALLOW_RUN_AS_ROOT: 1
OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1
steps:
- uses: actions/checkout@v1
with:
submodules: true
- name: Configuration
run: |
git config --global user.email "[email protected]"
git config --global user.name "Github CI"
- name: Build h5bench
run: |
export HDF5_HOME=/opt/hdf5
mkdir build
cd build
cmake .. \
-DH5BENCH_ALL=ON
make -j 2
make install
ldconfig
- name: Test h5bench SYNC write/read
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-contig-1d-small.json
- name: Test h5bench SYNC write 1D contiguous (memory) strided (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-strided.json
- name: Test h5bench SYNC write 1D contiguous (memory) contiguous (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig.json
- name: Test h5bench SYNC write 1D contiguous (memory) interleaved (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-interleaved.json
- name: Test h5bench SYNC write 1D interleaved (memory) contiguous (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-interleaved-contig.json
- name: Test h5bench SYNC write 1D interleaved (memory) interleaved (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-interleaved-interleaved.json
- name: Test h5bench SYNC write 2D contiguous (memory) contiguous (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig.json
- name: Test h5bench SYNC write 2D contiguous (memory) interleaved (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-interleaved.json
- name: Test h5bench SYNC write 2D interleaved (memory) contiguous (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-interleaved-contig.json
- name: Test h5bench SYNC write 2D interleaved (memory) interleaved (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-interleaved-interleaved.json
- name: Test h5bench SYNC write 3D contiguous (memory) contiguous (file)
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-3d-contig-contig.json
- name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) full
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-full.json
- name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) partial
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-partial.json
- name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) strided
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-strided.json
- name: Test h5bench SYNC read 2D contiguous (memory) contiguous (file) full
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig-read-full.json
- name: Test h5bench SYNC read 3D contiguous (memory) contiguous (file) full
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig-read-full.json
- name: Test h5bench SYNC write unlimited
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-write-unlimited.json
- name: Test h5bench SYNC overwrite
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-overwrite.json
- name: Test h5bench SYNC append
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-append.json
- name: Test h5bench SYNC exerciser
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-exerciser.json
- name: Test h5bench SYNC metadata
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-metadata.json
- name: Test h5bench SYNC amrex
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-amrex.json
- name: Test h5bench SYNC openpmd
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-openpmd.json
- name: Test h5bench SYNC e3sm
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-e3sm.json
- name: Test h5bench SYNC macsio
run: |
export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
cd build
./h5bench --debug --abort-on-failure ../samples/sync-macsio.json
- name: Setup tmate session
if: ${{ failure() }}
uses: mxschmitt/action-tmate@v3
- name: Upload artifact
if: always()
uses: actions/upload-artifact@v2
with:
name: test
path: build/storage/**/std*
retention-days: 5