Merge branch 'master' into read-the-docs-setup

.github/workflows/nersc.yml

@@ -0,0 +1,14 @@
+name: NERSC
+
+on:
+  workflow_dispatch:
+  push:
+
+jobs:
+  synchronize:
+    runs-on: ubuntu-20.04
+    timeout-minutes: 5
+    steps:
+      - name: Synchronize NERSC CI
+        run: |
+          curl --request POST --header "PRIVATE-TOKEN: ${{ secrets.NERSC_GITLAB_TOKEN }}" "${{ secrets.NERSC_GITLAB_URL }}"

.gitlab-ci.yml

@@ -9,6 +9,8 @@ stages:
 
 build-perlmutter:
     stage: build
+    when: manual
+    allow_failure: false
     rules:
         - if: '$METRICS == null'
     tags:
@@ -47,7 +49,7 @@ test-perlmutter:
     script:
         - echo "Test h5bench SYNC"
         - cd ${H5BENCH_BUILD_PATH}/perlmutter
-        - export LD_LIBRARY_PATH=$HDF5_DIR/lib:$LD_LIBRARY_PATH
+        - export LD_LIBRARY_PATH=$HDF5_DIR/lib:$H5BENCH_INSTALL_PATH/perlmutter/lib:$LD_LIBRARY_PATH
         - echo "Test h5bench SYNC write/read"
         - python3 ../../samples/update-perlmutter.py ../../samples/sync-write-read-contig-1d-small.json
         - ./h5bench --debug --abort-on-failure --validate-mode ../../samples/sync-write-read-contig-1d-small.json

RELEASE.txt

@@ -1,4 +1,4 @@
-h5bench version 1.2
+h5bench version 1.4
 ===================
 
 
@@ -36,4 +36,4 @@ RELEASE
 - h5bench v.1.1
 
   - New flexible JSON configuration framework to run workflows
-  - Update documention
+  - Update documention

samples/update-perlmutter.py

@@ -23,5 +23,11 @@
 
 data['mpi']['configuration'] = 'srun -A m2621 --qos=debug --constraint=cpu --tasks-per-node=64 -N 1 -n 4 -t 00:30:00'
 
+if 'library' in data['vol']:
+    data['vol']['library'] = '{}:{}'.format(
+        data['vol']['library'],
+        os.getenv('LD_LIBRARY_PATH')
+    )
+
 with open(ARGS.setup, 'w') as f:
     json.dump(data, f, indent=4, sort_keys=False)