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pkgcheck results - main #36

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github-actions bot opened this issue Jan 24, 2022 · 18 comments
Open

pkgcheck results - main #36

github-actions bot opened this issue Jan 24, 2022 · 18 comments

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github-actions bot commented Jan 24, 2022

Checks for geodist (v0.0.7.022)

git hash: 96552497

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'CITATION' file.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 91.8%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.

Package License: MIT + file LICENSE


1. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (89% in 14 files) and R (11% in 5 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 3 exported functions (median 27 lines of code)
  • 42 non-exported functions in R (median 12 lines of code)
  • 94 R functions (median 27 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 5 34.7
files_src 14 95.0
files_vignettes 1 68.4
files_tests 5 81.7
loc_R 319 34.2
loc_src 2692 80.5
loc_vignettes 182 46.0
loc_tests 416 71.3
num_vignettes 1 64.8
n_fns_r 45 53.4
n_fns_r_exported 3 12.9
n_fns_r_not_exported 42 62.9
n_fns_src 94 78.5
n_fns_per_file_r 6 73.0
n_fns_per_file_src 7 63.1
num_params_per_fn 4 54.6
loc_per_fn_r 13 39.7
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 12 39.1
loc_per_fn_src 27 80.7
rel_whitespace_R 30 51.8
rel_whitespace_src 16 78.3
rel_whitespace_vignettes 12 15.1
rel_whitespace_tests 14 59.8
doclines_per_fn_exp 38 47.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 201 88.7

1a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


2. goodpractice and other checks

Details of goodpractice and other checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

name conclusion sha date
pages build and deployment success 9a223d 2022-01-30
pkgcheck 965524 2022-01-30
pkgdown success 965524 2022-01-30
R-CMD-check success 965524 2022-01-30
test-coverage success 965524 2022-01-30

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 91.77

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


Package Versions

package version
pkgstats 0.0.3.88
pkgcheck 0.0.2.227

@github-actions
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Author

Checks for geodist (v0.0.8.006)

git hash: fafde573

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✖️ The following function has no documented return value: [geodist_min]
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.2%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

Important: All failing checks above must be addressed prior to proceeding

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 1
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (91% in 15 files) and R (9% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 23 lines of code)
  • 43 non-exported functions in R (median 12 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 334 35.4
loc_src 3327 83.4
loc_vignettes 182 46.0
loc_tests 435 72.2
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 13 39.7
loc_per_fn_r_exp 24 53.7
loc_per_fn_r_not_exp 12 39.1
loc_per_fn_src 26 79.6
rel_whitespace_R 30 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 12 15.1
rel_whitespace_tests 15 62.7
doclines_per_fn_exp 38 48.3
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
5347356001 pages build and deployment success 23bee3 18 2023-06-22
5347333167 pkgcheck NA fafde5 20 2023-06-22
5347333169 pkgdown success fafde5 38 2023-06-22
5347333170 R-CMD-check NA fafde5 40 2023-06-22
5347333168 test-coverage success fafde5 40 2023-06-22

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.25

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.3.4
pkgcheck 0.1.1.26

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@github-actions
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Author

Checks for geodist (v0.0.8.007)

git hash: 789eb46e

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.2%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 1
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (91% in 15 files) and R (9% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 23 lines of code)
  • 43 non-exported functions in R (median 12 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 334 35.4
loc_src 3327 83.4
loc_vignettes 182 46.0
loc_tests 435 72.2
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 13 39.7
loc_per_fn_r_exp 24 53.7
loc_per_fn_r_not_exp 12 39.1
loc_per_fn_src 26 79.6
rel_whitespace_R 30 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 12 15.1
rel_whitespace_tests 15 62.7
doclines_per_fn_exp 40 51.1
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
5347463583 pages build and deployment success 71bea8 19 2023-06-22
5347444509 pkgcheck NA 789eb4 21 2023-06-22
5347444515 pkgdown success 789eb4 39 2023-06-22
5347444514 R-CMD-check NA 789eb4 41 2023-06-22
5347444513 test-coverage success 789eb4 41 2023-06-22

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.17

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.3.4
pkgcheck 0.1.1.26

@github-actions
Copy link
Author

Checks for geodist (v0.0.8.015)

git hash: ebf471d7

  • ✖️ Package name is not available (on CRAN).
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.3%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

Important: All failing checks above must be addressed prior to proceeding

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 383 39.3
loc_src 3327 83.4
loc_vignettes 207 50.7
loc_tests 538 76.3
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 16 49.2
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 52.7
loc_per_fn_src 26 79.6
rel_whitespace_R 26 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 11 15.1
rel_whitespace_tests 11 61.1
doclines_per_fn_exp 40 51.1
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
5924589060 pages build and deployment success 244f05 20 2023-08-21
5924568132 pkgcheck NA ebf471 22 2023-08-21
5924568125 pkgdown success ebf471 40 2023-08-21
5924568136 R-CMD-check NA ebf471 42 2023-08-21
5924568129 test-coverage success ebf471 42 2023-08-21

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.26

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.3.4
pkgcheck 0.1.2.1

@github-actions
Copy link
Author

Checks for geodist (v0.0.8.016)

git hash: 9d296970

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.3%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 383 39.3
loc_src 3327 83.4
loc_vignettes 207 50.7
loc_tests 538 76.3
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 16 49.2
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 52.7
loc_per_fn_src 26 79.6
rel_whitespace_R 26 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 11 15.1
rel_whitespace_tests 11 61.1
doclines_per_fn_exp 40 51.1
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
6284075588 pages build and deployment success 9c12dd 21 2023-09-23
6284067395 pkgcheck NA 9d2969 23 2023-09-23
6284067390 pkgdown success 9d2969 41 2023-09-23
6284067396 R-CMD-check NA 9d2969 43 2023-09-23
6284067392 test-coverage success 9d2969 43 2023-09-23

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.26

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.3.8
pkgcheck 0.1.2.3

Copy link
Author

Checks for geodist (v0.0.8.016)

git hash: 7c85bf9c

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.8%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 383 39.3
loc_src 3327 83.4
loc_vignettes 207 50.7
loc_tests 538 76.3
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 16 49.2
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 52.7
loc_per_fn_src 26 79.6
rel_whitespace_R 26 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 11 15.1
rel_whitespace_tests 11 61.1
doclines_per_fn_exp 40 51.1
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
7489233784 pages build and deployment NA 81b935 22 2024-01-11
7489200858 pkgcheck NA 7c85bf 24 2024-01-11
7489200880 pkgdown success 7c85bf 43 2024-01-11
7489200872 R-CMD-check NA 7c85bf 45 2024-01-11
7489200882 test-coverage success 7c85bf 45 2024-01-11

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.78

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.3.9
pkgcheck 0.1.2.11

Copy link
Author

Checks for geodist (v0.0.8.016)

git hash: df073cd3

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.4%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 384 39.4
loc_src 3327 83.4
loc_vignettes 207 50.7
loc_tests 538 76.3
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 16 49.2
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 52.7
loc_per_fn_src 26 79.6
rel_whitespace_R 26 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 11 15.1
rel_whitespace_tests 11 61.1
doclines_per_fn_exp 40 51.1
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
9027813437 pages build and deployment success b3ea75 23 2024-05-10
9027789479 pkgcheck NA df073c 25 2024-05-10
9027789488 pkgdown success df073c 46 2024-05-10
9027789480 R-CMD-check NA df073c 48 2024-05-10
9027789487 test-coverage success df073c 48 2024-05-10

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.36

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.3.13
pkgcheck 0.1.2.21

Copy link
Author

Checks for geodist (v0.0.8.021)

git hash: 9824d76a

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.3%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 384 39.4
loc_src 3327 83.4
loc_vignettes 207 50.7
loc_tests 538 76.3
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 16 49.2
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 52.7
loc_per_fn_src 26 79.6
rel_whitespace_R 26 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 11 15.1
rel_whitespace_tests 11 61.1
doclines_per_fn_exp 40 51.1
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
9209121208 pages build and deployment success ef8686 25 2024-05-23
9209098041 pkgcheck NA 9824d7 27 2024-05-23
9209098028 pkgdown success 9824d7 48 2024-05-23
9209098032 R-CMD-check NA 9824d7 50 2024-05-23
9209098046 test-coverage success 9824d7 50 2024-05-23

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.32

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.5.2
pkgcheck 0.1.2.40

Copy link
Author

Checks for geodist (v0.0.8.024)

git hash: 59f15d19

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.3%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 384 39.4
loc_src 3327 83.4
loc_vignettes 207 50.7
loc_tests 538 76.3
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 16 49.2
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 52.7
loc_per_fn_src 26 79.6
rel_whitespace_R 26 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 11 15.1
rel_whitespace_tests 11 61.1
doclines_per_fn_exp 40 51.1
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
9209703987 pages build and deployment success 84ff19 26 2024-05-23
9209677135 pkgcheck NA 59f15d 28 2024-05-23
9209677136 pkgdown success 59f15d 49 2024-05-23
9209677137 R-CMD-check NA 59f15d 51 2024-05-23
9209677133 test-coverage success 59f15d 51 2024-05-23

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.27

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.5.2
pkgcheck 0.1.2.40

Copy link
Author

Checks for geodist (v0.1.0)

git hash: 2ab46fc9

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.4%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 40.3
files_src 15 95.4
files_vignettes 1 68.4
files_tests 6 84.4
loc_R 384 39.4
loc_src 3327 83.4
loc_vignettes 207 50.7
loc_tests 538 76.3
num_vignettes 1 64.8
n_fns_r 47 54.8
n_fns_r_exported 4 18.5
n_fns_r_not_exported 43 63.6
n_fns_src 116 81.4
n_fns_per_file_r 5 67.2
n_fns_per_file_src 8 68.3
num_params_per_fn 4 54.6
loc_per_fn_r 16 49.2
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 52.7
loc_per_fn_src 26 79.6
rel_whitespace_R 26 52.9
rel_whitespace_src 16 80.8
rel_whitespace_vignettes 11 15.1
rel_whitespace_tests 11 61.1
doclines_per_fn_exp 40 51.1
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.6

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
9210152916 pages build and deployment success 0708e2 27 2024-05-23
9210123629 pkgcheck NA 2ab46f 29 2024-05-23
9210153940 pkgdown NA 2ab46f 51 2024-05-23
9210123639 R-CMD-check success 2ab46f 52 2024-05-23
9210123626 test-coverage success 2ab46f 52 2024-05-23

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.36

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found the following 4 potential issues:

message number of times
Avoid library() and require() calls in packages 1
Avoid using sapply, consider vapply instead, that's type safe 3


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.1.5.2
pkgcheck 0.1.2.40

Copy link
Author

Checks for geodist (v0.1.0.002)

git hash: bdbfb07a

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 76.8%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 37.9
loc_src 3327 86.4
loc_vignettes 207 48.2
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.4
n_fns_per_file_r 5 68.7
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.0
rel_whitespace_vignettes 11 13.9
rel_whitespace_tests 11 59.1
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 90.9

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
11996243810 pages build and deployment success 3e715f 30 2024-11-24
11996227996 pkgcheck NA bdbfb0 31 2024-11-24
11996227992 pkgdown success bdbfb0 53 2024-11-24
11996227995 R-CMD-check NA bdbfb0 54 2024-11-24
11996227997 test-coverage success bdbfb0 54 2024-11-24

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 76.84

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

Copy link
Author

Checks for geodist (v0.1.0.003)

git hash: 3c61f674

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.8%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 38.0
loc_src 3327 86.5
loc_vignettes 207 48.2
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.3
n_fns_per_file_r 5 68.7
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.1
rel_whitespace_vignettes 11 13.9
rel_whitespace_tests 11 59.1
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 90.9

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
12006146925 .github/workflows/test-coverage.yaml failure 3c61f6 55 2024-11-25
12006168830 pages build and deployment success b1c3c2 33 2024-11-25
12006147025 pkgcheck NA 3c61f6 32 2024-11-25
11996227992 pkgdown success bdbfb0 53 2024-11-24
12006147035 pkgdown.yaml success 3c61f6 54 2024-11-25
11996227995 R-CMD-check failure bdbfb0 54 2024-11-24
12006147029 R-CMD-check.yaml failure 3c61f6 55 2024-11-25
11996227997 test-coverage success bdbfb0 54 2024-11-24

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.76

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

Copy link
Author

Checks for geodist (v0.1.0.005)

git hash: abc4980c

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.4%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 38.0
loc_src 3327 86.5
loc_vignettes 207 48.2
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.3
n_fns_per_file_r 5 68.7
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.1
rel_whitespace_vignettes 11 13.9
rel_whitespace_tests 11 59.1
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 90.9

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
12006146925 .github/workflows/test-coverage.yaml failure 3c61f6 55 2024-11-25
12006298491 pages build and deployment NA a9e295 36 2024-11-25
12006252187 pkgcheck NA abc498 33 2024-11-25
11996227992 pkgdown success bdbfb0 53 2024-11-24
12006252188 pkgdown.yaml success abc498 55 2024-11-25
11996227995 R-CMD-check failure bdbfb0 54 2024-11-24
12006252185 R-CMD-check.yaml failure abc498 56 2024-11-25
11996227997 test-coverage success bdbfb0 54 2024-11-24
12006252214 test-coverage.yaml failure abc498 56 2024-11-25

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.4

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

Copy link
Author

Checks for geodist (v0.1.0.007)

git hash: 25a9218b

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.2%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 38.0
loc_src 3327 86.5
loc_vignettes 207 48.2
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.3
n_fns_per_file_r 5 68.7
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.1
rel_whitespace_vignettes 11 13.9
rel_whitespace_tests 11 59.1
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 90.9

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
12006146925 .github/workflows/test-coverage.yaml failure 3c61f6 55 2024-11-25
12006877743 pages build and deployment failure c627a3 38 2024-11-25
12006852772 pkgcheck NA 25a921 34 2024-11-25
11996227992 pkgdown success bdbfb0 53 2024-11-24
12006852768 pkgdown.yaml success 25a921 56 2024-11-25
11996227995 R-CMD-check failure bdbfb0 54 2024-11-24
12006852767 R-CMD-check.yaml failure 25a921 57 2024-11-25
11996227997 test-coverage success bdbfb0 54 2024-11-24
12006852770 test-coverage.yaml failure 25a921 57 2024-11-25

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.23

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

Copy link
Author

Checks for geodist (v0.1.0.009)

git hash: c31dcec0

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.4%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 38.0
loc_src 3327 86.5
loc_vignettes 207 48.2
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.3
n_fns_per_file_r 5 68.7
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.1
rel_whitespace_vignettes 11 13.9
rel_whitespace_tests 11 59.1
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 90.9

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
12006146925 .github/workflows/test-coverage.yaml failure 3c61f6 55 2024-11-25
12007091053 pages build and deployment success b8355c 41 2024-11-25
12007068577 pkgcheck NA c31dce 36 2024-11-25
12007068559 pkgdown.yaml success c31dce 58 2024-11-25
12007068575 R-CMD-check.yaml failure c31dce 59 2024-11-25
12007068567 test-coverage.yaml failure c31dce 59 2024-11-25

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.41

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

Copy link
Author

Checks for geodist (v0.1.0.010)

git hash: b317effd

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 76.8%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 38.0
loc_src 3327 86.5
loc_vignettes 207 48.2
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.3
n_fns_per_file_r 5 68.7
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.1
rel_whitespace_vignettes 11 13.9
rel_whitespace_tests 11 59.1
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 90.9

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
12007232252 pages build and deployment NA f93d81 44 2024-11-25
12007183716 pkgcheck NA b317ef 37 2024-11-25
12007183720 pkgdown.yaml success b317ef 59 2024-11-25
12007183725 R-CMD-check.yaml NA b317ef 60 2024-11-25
12007183719 test-coverage.yaml failure b317ef 60 2024-11-25

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 76.84

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

Copy link
Author

Checks for geodist (v0.1.0.012)

git hash: 27ae8657

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.3%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 38.0
loc_src 3327 86.5
loc_vignettes 207 48.2
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.3
n_fns_per_file_r 5 68.7
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.1
rel_whitespace_vignettes 11 13.9
rel_whitespace_tests 11 59.0
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 90.9

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
12026788003 pages build and deployment success c30c94 46 2024-11-26
12026755497 pkgcheck NA 27ae86 39 2024-11-26
12026755525 pkgdown.yaml success 27ae86 63 2024-11-26
12026755508 R-CMD-check.yaml success 27ae86 64 2024-11-26
12026755506 test-coverage.yaml failure 27ae86 64 2024-11-26

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.27

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

Copy link
Author

Checks for geodist (v0.1.0.013)

git hash: 46b4241d

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.8%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 38.0
loc_src 3327 86.5
loc_vignettes 207 48.2
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.3
n_fns_per_file_r 5 68.7
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.8
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.1
rel_whitespace_vignettes 11 13.9
rel_whitespace_tests 11 59.0
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.0

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
12047039567 pages build and deployment success d28d5f 48 2024-11-27
12047015998 pkgcheck NA 46b424 41 2024-11-27
12047016015 pkgdown.yaml success 46b424 68 2024-11-27
12047016026 R-CMD-check.yaml success 46b424 69 2024-11-27
12047016013 test-coverage.yaml failure 46b424 69 2024-11-27

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.84

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

Copy link
Author

Checks for geodist (v0.1.0.014)

git hash: a08240e5

  • ✔️ Package is already on CRAN.
  • ✔️ has a 'codemeta.json' file.
  • ✔️ has a 'contributing' file.
  • ✔️ uses 'roxygen2'.
  • ✔️ 'DESCRIPTION' has a URL field.
  • ✔️ 'DESCRIPTION' has a BugReports field.
  • ✔️ Package has at least one HTML vignette
  • ✔️ All functions have examples.
  • ✔️ Package has continuous integration checks.
  • ✔️ Package coverage is 78.2%.
  • ✔️ R CMD check found no errors.
  • ✔️ R CMD check found no warnings.
  • 👀 Function names are duplicated in other packages

(Checks marked with 👀 may be optionally addressed.)

Package License: MIT + file LICENSE


1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type package ncalls
internal base 39
internal geodist 29
internal stats 3
imports NA NA
suggests knitr NA
suggests rmarkdown NA
suggests testthat NA
linking_to NA NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

as.vector (9), c (7), lapply (3), unlist (3), matrix (2), seq_along (2), abs (1), cbind (1), drop (1), grep (1), grepl (1), if (1), ifelse (1), is.numeric (1), mean (1), names (1), paste0 (1), rbind (1), which (1)

geodist

find_xy_cols (2), geodist (2), geodist_paired (2), geodist_paired_vec (2), match_xy_pattern (2), check_max_d (1), check_vec_inputs (1), chk_is_num_len_1 (1), convert_to_matrix (1), f (1), geodist_benchmark (1), geodist_min (1), geodist_seq (1), geodist_seq_vec (1), geodist_vec (1), geodist_x (1), geodist_x_vec (1), geodist_xy (1), geodist_xy_vec (1), georange (1), georange_seq (1), georange_x (1), georange_xy (1), get_delta (1)

stats

runif (2), optim (1)

NOTE: No imported packages appear to have associated function calls; please ensure with author that these 'Imports' are listed appropriately.


2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

  • code in C (90% in 15 files) and R (10% in 6 files)
  • 2 authors
  • 1 vignette
  • no internal data file
  • 1 imported package
  • 4 exported functions (median 27 lines of code)
  • 43 non-exported functions in R (median 16 lines of code)
  • 116 R functions (median 26 lines of code)

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

  • loc = "Lines of Code"
  • fn = "function"
  • exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure value percentile noteworthy
files_R 6 37.1
files_src 15 97.2
files_vignettes 1 61.9
files_tests 6 79.4
loc_R 384 38.0
loc_src 3327 86.5
loc_vignettes 207 48.3
loc_tests 538 72.7
num_vignettes 1 58.9
n_fns_r 47 53.4
n_fns_r_exported 4 20.0
n_fns_r_not_exported 43 61.6
n_fns_src 116 86.3
n_fns_per_file_r 5 68.8
n_fns_per_file_src 8 73.2
num_params_per_fn 4 51.2
loc_per_fn_r 16 49.6
loc_per_fn_r_exp 27 58.7
loc_per_fn_r_not_exp 16 53.0
loc_per_fn_src 26 81.3
rel_whitespace_R 26 50.3
rel_whitespace_src 16 85.1
rel_whitespace_vignettes 11 14.0
rel_whitespace_tests 11 59.0
doclines_per_fn_exp 40 51.0
doclines_per_fn_not_exp 0 0.0 TRUE
fn_call_network_size 279 91.0

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.


3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

R-CMD-check
pkgcheck

GitHub Workflow Results

id name conclusion sha run_number date
12065343820 pages build and deployment success f93112 50 2024-11-28
12065319216 pkgcheck NA a08240 43 2024-11-28
12065319227 pkgdown.yaml success a08240 73 2024-11-28
12065319210 R-CMD-check.yaml success a08240 74 2024-11-28
12065319214 test-coverage.yaml failure a08240 74 2024-11-28

3b. goodpractice results

R CMD check with rcmdcheck

rcmdcheck found no errors, warnings, or notes

Test coverage with covr

Package coverage: 78.23

Cyclocomplexity with cyclocomp

No functions have cyclocomplexity >= 15

Static code analyses with lintr

lintr found no issues with this package!


4. Other Checks

Details of other checks (click to open)

✖️ The following 2 function names are duplicated in other packages:

    • geodist from gear, gmt, sna, spaa
    • georange from divDyn


Package Versions

package version
pkgstats 0.2.0.48
pkgcheck 0.1.2.77

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