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Click on 'Error Report' to download TSV file of errors: ERROR_report.csv
TSV error report reports 4 rows that have errors because treatment_setting has a value that is not permissible.
It appears the clinical exception value of Not applicable for the treatment_setting field is being reported as an error incorrectly, even though the treatment_setting field has a clinical exception (NOTE: The pink error box at the top does not report this error).
Clinical API confirms treatment_setting has a clinical exception value of Not applicable:
Expected behaviour
Fields which have clinical exception values should not be reported as an error in the downloaded TSV error report file.
The text was updated successfully, but these errors were encountered:
hknahal
changed the title
🐛 Clinical exception values reported as errors in 'Submitted Data' view
🐛 Clinical exception values reported as errors in Submitted Data view
Aug 21, 2023
This issue is seen in Prod as well in the APGI-AU program. The Submitted Data view for Treatment data is reporting 2 errors for the treatment_setting field but the submitted values are valid. It's unclear which rows exactly are being reported as errors because the cells with the error are not highlighted in the table. The submitted value Not applicable is valid because a program-level exception has been applied to the treatment_setting field. The submitted value Advanced/Metastatic is also valid because it is an enum value from the dictionary for the treatment_setting field:
Describe the bug
Fields which have clinical exception values (ie.
treatment_setting
=Not applicable
) are reported as errors in the downloaded error report TSV fileSteps To Reproduce
Link to view
Treatment
data in "Submitted Data" view inTEST-CA
program on Staging: https://platform.staging.icgc-argo.org/submission/program/TEST-CA/clinical-data?donorId=&tab=treatmentSteps to reproduce the behaviour:
100 rows
treatment_setting
has a value that is not permissible.It appears the clinical exception value of
Not applicable
for thetreatment_setting
field is being reported as an error incorrectly, even though thetreatment_setting
field has a clinical exception (NOTE: The pink error box at the top does not report this error).Clinical API confirms
treatment_setting
has a clinical exception value ofNot applicable
:Expected behaviour
Fields which have clinical exception values should not be reported as an error in the downloaded TSV error report file.
The text was updated successfully, but these errors were encountered: