setup.py

from setuptools import setup, find_packages
from codecs import open
from os import path
import os.path

# to update
# Update intern.version.__version__
# python setup.py sdist
# twine upload dist/*

import codecs
import os.path


def read(rel_path):
    here = os.path.abspath(os.path.dirname(__file__))
    with codecs.open(os.path.join(here, rel_path), "r") as fp:
        return fp.read()


def get_version(rel_path):
    for line in read(rel_path).splitlines():
        if line.startswith("__version__"):
            delim = '"' if '"' in line else "'"
            return line.split(delim)[1]
        else:
            raise RuntimeError("Unable to find version string.")


__version__ = get_version("intern/version/__init__.py")

here = path.abspath(path.dirname(__file__))

# Get the long description from the README file
with open(path.join(here, "README.md"), encoding="utf-8") as f:
    long_description = f.read()

# get the dependencies and installs
with open(path.join(here, "requirements.txt"), encoding="utf-8") as f:
    all_reqs = f.read().split("\n")

install_requires = [x.strip() for x in all_reqs if "git+" not in x]
dependency_links = [
    x.strip().replace("git+", "") for x in all_reqs if x.startswith("git+")
]

setup(
    name="intern",
    version=__version__,
    description="Python SDK for interacting with neuroscience data via the Boss API.",
    long_description=long_description,
    long_description_content_type="text/markdown",
    url="https://github.com/jhuapl-boss/intern",
    download_url="https://github.com/jhuapl-boss/intern/tarball/" + __version__,
    license="Apache 2.0",
    classifiers=[
        "Development Status :: 4 - Beta",
        "Intended Audience :: Developers",
        "Programming Language :: Python :: 3.6",
        "Programming Language :: Python :: 3.7",
    ],
    keywords=[
        "brain",
        "microscopy",
        "neuroscience",
        "connectome",
        "connectomics",
        "spatial",
        "EM",
        "electron",
        "calcium",
        "database",
        "boss",
        "microns",
    ],
    packages=find_packages(exclude=["docs", "tests*"]),
    include_package_data=True,
    author="Johns Hopkins University Applied Physics Laboratory",
    install_requires=install_requires,
    extras_require={
        "cloudvolume": ["cloud-volume==6.1.1", "brotli>=1.0.7"],
        "meshing": ["zmesh>=0.5.0"],
    },
    dependency_links=dependency_links,
    author_email="iarpamicrons@jhuapl.edu",
)