You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I just ran segments against a directory that i was expecting to get as many as 2.5 million segments for a given species. running without the max_segments parm maxed out at 100 output files per species. i see a default in in the code for 100 so i'm planning to run again and override that with a really high max_segments. like maybe 3000000.
any thoughts about how things will go? basically i'm looking for a segment per ID, rather than a random sample of them. do you have a sense of a practical upper limit on the number of segments/species? i don't mind a run that takes a week or so, but i'm wondering if i'll just run out of RAM along the way.
i know -- silliy-big dataset. ridiculous to capture all the segments. but that's what i'd like to shoot for. any thoughts about a practical upper limit for max_segments?
thanks in advance,
mike o'connor
The text was updated successfully, but these errors were encountered:
I just ran segments against a directory that i was expecting to get as many as 2.5 million segments for a given species. running without the max_segments parm maxed out at 100 output files per species. i see a default in in the code for 100 so i'm planning to run again and override that with a really high max_segments. like maybe 3000000.
any thoughts about how things will go? basically i'm looking for a segment per ID, rather than a random sample of them. do you have a sense of a practical upper limit on the number of segments/species? i don't mind a run that takes a week or so, but i'm wondering if i'll just run out of RAM along the way.
i know -- silliy-big dataset. ridiculous to capture all the segments. but that's what i'd like to shoot for. any thoughts about a practical upper limit for max_segments?
thanks in advance,
mike o'connor
The text was updated successfully, but these errors were encountered: