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Gene page improvements #66

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8 of 10 tasks
onursumer opened this issue Oct 5, 2020 · 0 comments
Open
8 of 10 tasks

Gene page improvements #66

onursumer opened this issue Oct 5, 2020 · 0 comments
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enhancement New feature or request

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@onursumer
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onursumer commented Oct 5, 2020

  • Update Mutation Status values as: Somatic, Germline - Pathogenic, Germline - Benign/VUS
  • Add Cancer Type column. (List all non-zero variant tumor types)
  • Only show Pathogenic Germline by default. (Just update default filter) (Decided to revert this)
  • Remove the Penetrance column and add the H/M/L/U to Annotation column
  • Rename % to % Prevalence
  • + expanded table: Exclude tumor types with 0 variants.
  • If GenomeNexus has ClinVar pathogenicity; add that under Annotation column.
  • Hide (or remove?) dbSNP ID and ClinVar ID columns.
  • Add HGVS columns (Add hgvsg and hgvsc to gene page #71)
  • Show germline mutations in table on top (sort by germline)
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