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Mashtree v1.4.6 is available at conda but its still showing v0.37 #84

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MHassanSaeed opened this issue Dec 21, 2023 · 4 comments
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@MHassanSaeed
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Hi there,

I am installing Mashtree with conda but its version is outdated, although its says v1.4.6 here:
https://anaconda.org/bioconda/mashtree

What could be an issue here?

Best,
Hassan

@lskatz
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lskatz commented Dec 21, 2023

Please provide more information on the steps that you took to get here, because yes it is working

@lskatz
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lskatz commented Dec 21, 2023

Here is the bug reporting template, for reference:

Describe the bug
A clear and concise description of what the bug is.

To Reproduce
Steps to reproduce the behavior:

  1. Go to '...'
  2. Click on '....'
  3. Scroll down to '....'
  4. See error

Expected behavior
A clear and concise description of what you expected to happen.

Screenshots
If applicable, add screenshots to help explain your problem.

Desktop (please complete the following information):

  • OS: [e.g. iOS]
  • Version [e.g. v0.57, can be obtained by running mashtree --version.]
  • which method did you install with? E.g., cpanm, git clone, ...

Additional context
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@MHassanSaeed
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MHassanSaeed commented Dec 22, 2023

Hi Iskatz,

I used these two commands to install mashtree:

conda install -c bioconda mashtree

conda install -c "bioconda/label/cf201901" mashtree

It is working fine but mashtree_bootstrap.pl doesn't works.

The version of mashtree mentioned at the site is v1.4.6 but
mashtree --version shows its 0.37

Thanks

@lskatz
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lskatz commented Dec 22, 2023

Although I appreciate the conda installation, I do not support it here. Please read the documentation on installation and let me know if you were able to install it. https://github.com/lskatz/mashtree/blob/master/docs/INSTALL.md

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