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config.json
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{
"manifest": {
"$BASE_DIR": "${configdir}",
"$NETWORK_DIR": "$BASE_DIR/network",
"$OUTPUT_DIR": "$BASE_DIR/output",
"$COMPONENTS_DIR": "$BASE_DIR/components"
},
"target_simulator": "NEST",
"run": {
"tstart": 0.0,
"tstop": 3000.0,
"dt": 0.01
},
"inputs": {
"LGN_spikes": {
"input_type": "spikes",
"module": "h5",
"input_file": "$BASE_DIR/lgn_spikes.h5",
"node_set": "LGN"
}
},
"output": {
"log_file": "log.txt",
"output_dir": "$OUTPUT_DIR",
"spikes_file": "spikes.h5",
"quiet_simulator": true
},
"components": {
"synaptic_models_dir": "$COMPONENTS_DIR/synaptic_models",
"point_neuron_models_dir": "$COMPONENTS_DIR/point_neuron_models"
},
"networks": {
"nodes": [
{
"node_types_file": "$NETWORK_DIR/LGN_node_types.csv",
"nodes_file": "$NETWORK_DIR/LGN_nodes.h5"
},
{
"node_types_file": "$NETWORK_DIR/V1_node_types.csv",
"nodes_file": "$NETWORK_DIR/V1_nodes.h5"
}
],
"edges": [
{
"edge_types_file": "$NETWORK_DIR/V1_V1_edge_types.csv",
"edges_file": "$NETWORK_DIR/V1_V1_edges.h5"
},
{
"edge_types_file": "$NETWORK_DIR/LGN_V1_edge_types.csv",
"edges_file": "$NETWORK_DIR/LGN_V1_edges.h5"
}
],
"gap_juncs": []
}
}