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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method("+",ngscene)
S3method("-",ngscene)
S3method("[",nglayers)
S3method(as.character,ngscene)
S3method(as.data.frame,ng_raw_list)
S3method(as.mesh3d,ng_raw)
S3method(as.mesh3d,ng_raw_list)
S3method(as.neuron,navis.core.skeleton.TreeNeuron)
S3method(as.neuronlist,navis.core.base.BaseNeuron)
S3method(as.neuronlist,navis.core.neuronlist.NeuronList)
S3method(boundingbox,cloudvolume.frontends.graphene.CloudVolumeGraphene)
S3method(boundingbox,cloudvolume.lib.Bbox)
S3method(catmaid2ngl,character)
S3method(catmaid2ngl,default)
S3method(catmaid2ngl,neuron)
S3method(catmaid2ngl,neuronlist)
S3method(flywire_neurons_add_synapses,neuron)
S3method(flywire_neurons_add_synapses,neuronlist)
S3method(print,ngscene)
S3method(print,ntprediction)
S3method(unlist,ng_raw_list)
S3method(voxdims,ngscene)
S3method(xform,ngscene)
S3method(xyzmatrix,ng_raw)
S3method(xyzmatrix,ng_raw_list)
S3method(xyzmatrix,ngscene)
export("ngl_layers<-")
export("ngl_segments<-")
export(add_celltype_info)
export(braincircuits_login)
export(braincircuits_register)
export(braincircuits_token)
export(brainmaps_auth)
export(brainmaps_clear_cache)
export(brainmaps_fetch)
export(brainmaps_listfragments)
export(brainmaps_skeleton)
export(brainmaps_volume)
export(brainmaps_xyz2id)
export(catmaid2ngl)
export(choose_segmentation)
export(chunkedgraph_token)
export(compare_ng_neuron)
export(download_flywire_release_data)
export(download_neuron_obj)
export(dr_fafbseg)
export(fafb14_to_flywire_ids)
export(fafb2flywire)
export(fct2nginfo)
export(fetch_all_curl)
export(find_merged_segments)
export(find_topn)
export(flytable_alltables)
export(flytable_append_rows)
export(flytable_base)
export(flytable_cell_types)
export(flytable_columns)
export(flytable_list_rows)
export(flytable_list_selected)
export(flytable_login)
export(flytable_meta)
export(flytable_nrow)
export(flytable_query)
export(flytable_set_celltype)
export(flytable_set_token)
export(flytable_update_rows)
export(flywire2fafb)
export(flywire_adjacency_matrix)
export(flywire_adjacency_matrix2)
export(flywire_cave_client)
export(flywire_cave_query)
export(flywire_change_log)
export(flywire_cloudvolume)
export(flywire_connectome_data)
export(flywire_connectome_data_version)
export(flywire_dcvs)
export(flywire_expandurl)
export(flywire_fetch)
export(flywire_ids)
export(flywire_islatest)
export(flywire_l2ids)
export(flywire_last_modified)
export(flywire_latestid)
export(flywire_leaves)
export(flywire_nearest_nuclei)
export(flywire_neurons_add_synapses)
export(flywire_nm2raw)
export(flywire_ntplot)
export(flywire_ntplot3d)
export(flywire_ntpred)
export(flywire_nuclei)
export(flywire_partner_summary)
export(flywire_partner_summary2)
export(flywire_partners)
export(flywire_raw2nm)
export(flywire_rootid)
export(flywire_scene)
export(flywire_set_token)
export(flywire_shortenurl)
export(flywire_sirepo_file)
export(flywire_sirepo_file_memo)
export(flywire_synapse_annotations)
export(flywire_timestamp)
export(flywire_updateids)
export(flywire_user_info)
export(flywire_voxdims)
export(flywire_xyz2id)
export(make_merge_graph)
export(meshparty_skeletonize)
export(ngl_add_colours)
export(ngl_annotation_layers)
export(ngl_annotations)
export(ngl_blank_scene)
export(ngl_decode_scene)
export(ngl_encode_url)
export(ngl_layers)
export(ngl_segments)
export(open_fafb_ngl)
export(read.neuron.brainmaps)
export(read.neurons.brainmaps)
export(read_brainmaps_meshes)
export(read_cloudvolume_meshes)
export(read_l2dp)
export(read_l2skel)
export(read_mergeinfo)
export(read_ng_dump)
export(read_ng_raw)
export(read_segments)
export(read_segments2)
export(read_topn)
export(reroot_hairball)
export(save_cloudvolume_meshes)
export(segmentid2zip)
export(simple_python)
export(skeletor)
export(swc2segmentid)
export(tabify_coords)
export(with_segmentation)
export(write_nginfo)
export(zip2segmentstem)
import(data.table)
importFrom(Matrix,sparseMatrix)
importFrom(bit64,as.integer64)
importFrom(bit64,is.integer64)
importFrom(catmaid,catmaid_parse_url)
importFrom(catmaid,catmaid_skids)
importFrom(catmaid,read.neuron.catmaid)
importFrom(checkmate,assert_number)
importFrom(curl,curl_download)
importFrom(dplyr,.data)
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,arrange)
importFrom(dplyr,collect)
importFrom(dplyr,desc)
importFrom(dplyr,ends_with)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,inner_join)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,n_distinct)
importFrom(dplyr,rename)
importFrom(dplyr,right_join)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,top_n)
importFrom(dplyr,ungroup)
importFrom(grDevices,col2rgb)
importFrom(grDevices,rgb)
importFrom(httr,GET)
importFrom(httr,POST)
importFrom(httr,add_headers)
importFrom(httr,config)
importFrom(httr,content)
importFrom(httr,content_type)
importFrom(httr,content_type_json)
importFrom(httr,headers)
importFrom(httr,http_error)
importFrom(httr,message_for_status)
importFrom(httr,oauth2.0_token)
importFrom(httr,oauth_app)
importFrom(httr,oauth_endpoints)
importFrom(httr,status_code)
importFrom(httr,stop_for_status)
importFrom(httr,warn_for_status)
importFrom(httr,with_config)
importFrom(jsonlite,fromJSON)
importFrom(jsonlite,read_json)
importFrom(jsonlite,toJSON)
importFrom(magrittr,"%>%")
importFrom(memoise,forget)
importFrom(memoise,is.memoised)
importFrom(memoise,memoise)
importFrom(memoise,timeout)
importFrom(methods,as)
importFrom(methods,is)
importFrom(nabor,knn)
importFrom(nat,"data.frame<-")
importFrom(nat,as.neuron)
importFrom(nat,as.neuronlist)
importFrom(nat,boundingbox)
importFrom(nat,makeboundingbox)
importFrom(nat,neuronlist)
importFrom(nat,ngraph)
importFrom(nat,nlapply)
importFrom(nat,pointsinside)
importFrom(nat,progress_natprogress)
importFrom(nat,read.neurons)
importFrom(nat,voxdims)
importFrom(nat,xform)
importFrom(nat,xyzmatrix)
importFrom(nat,xyzmatrix2list)
importFrom(nat,xyzmatrix2str)
importFrom(nat.templatebrains,fit_xform)
importFrom(nat.templatebrains,xform_brain)
importFrom(progress,progress_bar)
importFrom(readr,col_double)
importFrom(readr,col_integer)
importFrom(readr,cols)
importFrom(readr,read_csv)
importFrom(rgl,as.mesh3d)
importFrom(rgl,plot3d)
importFrom(rgl,points3d)
importFrom(rgl,spheres3d)
importFrom(rgl,tmesh3d)
importFrom(rlang,.data)
importFrom(stats,na.omit)
importFrom(stats,setNames)
importFrom(stringr,str_match)
importFrom(tools,file_ext)
importFrom(tools,file_path_sans_ext)
importFrom(usethis,ui_code)
importFrom(usethis,ui_done)
importFrom(usethis,ui_info)
importFrom(usethis,ui_oops)
importFrom(usethis,ui_todo)
importFrom(utils,browseURL)
importFrom(utils,file_test)
importFrom(utils,unzip)