From 1966f36d4198bb38506d7a2b8951540070bc9dbe Mon Sep 17 00:00:00 2001 From: Philipp Schlegel Date: Mon, 16 Oct 2023 10:31:44 +0100 Subject: [PATCH] README: add some example references --- README.md | 24 ++++++++++++++++++++++-- 1 file changed, 22 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 9b277d1e..30efaaf4 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ -NAVis is a Python 3 (3.8 or later) library for **N**euron **A**nalysis and **Vis**ualization. +NAVis is a Python 3 library for **N**euron **A**nalysis and **Vis**ualization. ## Documentation NAVis is on [ReadTheDocs](http://navis.readthedocs.io/ "NAVis ReadTheDocs"). @@ -64,8 +64,28 @@ libraries built on top of NAVis: * [pymaid](https://pymaid.readthedocs.io/en/latest/) pulls and pushes data from/to CATMAID servers * [fafbseg](https://fafbseg-py.readthedocs.io/en/latest/index.html) contains tools to work with auto-segmented data for the FAFB EM dataset including FlyWire +## Who uses NAVis? +NAVis has been used in a range of neurobiological publications. Here's a semi-random sample +of recent papers: + +``` +BIFROST: a method for registering diverse imaging datasets, Brezovec et al., bioRxiv (2023); doi: https://doi.org/10.1101/2023.06.09.544408 + +Vimo: Visual Analysis of Neuronal Connectivity Motifs, Troidl et al., bioRxiv (2022); doi: https://doi.org/10.1101/2022.12.09.519772 + +Information flow, cell types and stereotypy in a full olfactory connectome, Schlegel, Bates et al., eLife (2021); doi: https://doi.org/10.7554/eLife.66018 + +Synaptic wiring motifs in posterior parietal cortex support decision-making, Kuan et al., bioRxiv (2022); doi: https://doi.org/10.1101/2022.04.13.488176 +``` + +Want to see your work listed here? Open an [Issue](https://github.com/navis-org/navis/issues) and tell us about it! + +## Citing NAVis +We'd love to know if you found NAVis useful for your research! You can help us +spread the word by citing the DOI provided by Zenodo [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.8191725.svg)](https://zenodo.org/doi/10.5281/zenodo.4699382) + ## License -This code is under GNU GPL V3 +This code is under [GNU GPL V3](LICENSE). ## Acknowledgments NAVis is inspired by and inherits much of its design from the excellent