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Nextflow log does not show run time and status #5879

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SuhasSrinivasan opened this issue Mar 12, 2025 · 1 comment
Open

Nextflow log does not show run time and status #5879

SuhasSrinivasan opened this issue Mar 12, 2025 · 1 comment

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@SuhasSrinivasan
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Bug report

Expected behavior and actual behavior

When using the nextflow log command, there is no duration and status for a running pipeline.
This was noticed when running the Nextflow ATAC-seq pipeline.
One of the ATAC-seq pipeline maintainers asked that this issue be reported to the Nextflow repository.
Initially reported here: nf-core/atacseq#400

Steps to reproduce the problem

nextflow log

Program output

$ nextflow log
TIMESTAMP          	DURATION	RUN NAME       	STATUS	REVISION ID	SESSION ID                          	COMMAND
2025-01-11 00:35:49	-       	trusting_liskov	-     	1a1dbe52ff 	fbe1700b-6ff3-4475-8b9e-b00e118903b1	nextflow run nf-core/atacseq --input ./exp2_sample_sheet.csv --outdir ./results

Environment

Nextflow version: v24.10.3
Hardware: Desktop
Executor: Local
Container engine: Docker 27.4.1
OS: Ubuntu 22.04.5 LTS x86_64
Version of nf-core/atacseq: 2.1.2

@bentsherman
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I believe this information is not updated until the run is completed

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