Trouble with brew upgrade command

[sitdownkevin]

Output of brew config

(base) ➜  ~ brew config
HOMEBREW_VERSION: 4.4.6
ORIGIN: https://github.com/Homebrew/brew
HEAD: cc0b5d6d05d1f3af5b2f53e9fbb1e7bfa0c332ab
Last commit: 6 days ago
Core tap JSON: 23 Nov 05:54 UTC
Core cask tap JSON: 23 Nov 05:54 UTC
HOMEBREW_PREFIX: /opt/homebrew
HOMEBREW_CASK_OPTS: []
HOMEBREW_MAKE_JOBS: 10
Homebrew Ruby: 3.3.6 => /opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.3.6/bin/ruby
CPU: 10-core 64-bit arm_donan
Clang: 16.0.0 build 1600
Git: 2.39.5 => /Library/Developer/CommandLineTools/usr/bin/git
Curl: 8.7.1 => /usr/bin/curl
macOS: 15.1.1-arm64
CLT: 16.1.0.0.1.1729049160
Xcode: N/A
Rosetta 2: false

Output of brew doctor

(base) ➜  ~ brew doctor
Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry or file an issue; just ignore this. Thanks!

Warning: No Cask quarantine support available: unknown reason.

Description of issue

Every time when I use brew upgrade command, an error occurs. This error appears when upgrading various casks.

==> Upgrading 1 outdated package:
zotero@beta 7.0.10-beta.2,dc47650eb -> 7.0.10-beta.3,56ae6d979
==> Upgrading zotero@beta
==> Downloading https://download.zotero.org/client/beta/7.0.10-beta.3%2B56ae6d979/Zotero-7.0.10-beta.3%2B56ae6d979.dmg
###################################################################################################################################################### 100.0%
==> Backing App 'Zotero.app' up to '/opt/homebrew/Caskroom/zotero@beta/7.0.10-beta.2,dc47650eb/Zotero.app'
==> Removing App '/Applications/Zotero.app'
==> Moving App 'Zotero.app' to '/Applications/Zotero.app'
/Library/Developer/CommandLineTools/usr/include/swift/module.modulemap:13:8: error: redefinition of module 'SwiftBridging'
11 | //===----------------------------------------------------------------------===//
12 | 
13 | module SwiftBridging {
   |        `- error: redefinition of module 'SwiftBridging'
14 |     header "bridging"
15 | 

/Library/Developer/CommandLineTools/usr/include/swift/bridging.modulemap:13:8: note: previously defined here
11 | //===----------------------------------------------------------------------===//
12 | 
13 | module SwiftBridging {
   |        `- note: previously defined here
14 |     header "bridging"
15 | 

/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/Foundation.framework/Modules/Foundation.swiftmodule/arm64e-apple-macos.swiftinterface:5:8: error: failed to build module 'CoreFoundation'; this SDK is not supported by the compiler (the SDK is built with 'Apple Swift version 6.0 effective-5.10 (swiftlang-6.0.0.7.43 clang-1600.0.25.3)', while this compiler is 'Apple Swift version 6.0.2 effective-5.10 (swiftlang-6.0.2.1.2 clang-1600.0.26.4)'). Please select a toolchain which matches the SDK.
    3 | // swift-module-flags: -target arm64e-apple-macos15.1 -target-variant arm64e-apple-ios18.1-macabi -enable-objc-interop -autolink-force-load -enable-library-evolution -module-link-name swiftFoundation -swift-version 5 -enforce-exclusivity=unchecked -O -library-level api -enable-upcoming-feature InferSendableFromCaptures -enable-bare-slash-regex -user-module-version 3107 -module-name Foundation -package-name "\"FoundationPreview\""
    4 | import Combine
    5 | import CoreFoundation
      |        `- error: failed to build module 'CoreFoundation'; this SDK is not supported by the compiler (the SDK is built with 'Apple Swift version 6.0 effective-5.10 (swiftlang-6.0.0.7.43 clang-1600.0.25.3)', while this compiler is 'Apple Swift version 6.0.2 effective-5.10 (swiftlang-6.0.2.1.2 clang-1600.0.26.4)'). Please select a toolchain which matches the SDK.
    6 | import Darwin
    7 | import Dispatch

/Library/Developer/CommandLineTools/usr/include/swift/module.modulemap: 0:
/Library/Developer/CommandLineTools/usr/include/swift/bridging.modulemap: 0:
/opt/homebrew/Library/Homebrew/cask/utils/copy-xattrs.swift:3:8: error: failed to build module 'Foundation'; this SDK is not supported by the compiler (the SDK is built with 'Apple Swift version 6.0 effective-5.10 (swiftlang-6.0.0.7.43 clang-1600.0.25.3)', while this compiler is 'Apple Swift version 6.0.2 effective-5.10 (swiftlang-6.0.2.1.2 clang-1600.0.26.4)'). Please select a toolchain which matches the SDK.
 1 | #!/usr/bin/swift
 2 | 
 3 | import Foundation
   |        `- error: failed to build module 'Foundation'; this SDK is not supported by the compiler (the SDK is built with 'Apple Swift version 6.0 effective-5.10 (swiftlang-6.0.0.7.43 clang-1600.0.25.3)', while this compiler is 'Apple Swift version 6.0.2 effective-5.10 (swiftlang-6.0.2.1.2 clang-1600.0.26.4)'). Please select a toolchain which matches the SDK.
 4 | 
 5 | struct SwiftErr: TextOutputStream {
==> Purging files for version 7.0.10-beta.3,56ae6d979 of Cask zotero@beta
==> Purging files for version 7.0.10-beta.3,56ae6d979 of Cask zotero@beta
Warning: Reverting upgrade for Cask zotero@beta
Warning: It seems there is already an App at '/Applications/Zotero.app'; overwriting.
==> Removing App '/Applications/Zotero.app'
==> Moving App 'Zotero.app' to '/Applications/Zotero.app'
Error: zotero@beta: Failure while executing; `/usr/bin/env /Library/Developer/CommandLineTools/usr/bin/swift -target arm64-apple-macosx15 /opt/homebrew/Library/Homebrew/cask/utils/copy-xattrs.swift /opt/homebrew/Caskroom/zotero@beta/7.0.10-beta.3,56ae6d979/Zotero.app /Applications/Zotero.app` exited with 1. Here's the output:
/Library/Developer/CommandLineTools/usr/include/swift/module.modulemap:13:8: error: redefinition of module 'SwiftBridging'
11 | //===----------------------------------------------------------------------===//
12 | 
13 | module SwiftBridging {
   |        `- error: redefinition of module 'SwiftBridging'
14 |     header "bridging"
15 | 

/Library/Developer/CommandLineTools/usr/include/swift/bridging.modulemap:13:8: note: previously defined here
11 | //===----------------------------------------------------------------------===//
12 | 
13 | module SwiftBridging {
   |        `- note: previously defined here
14 |     header "bridging"
15 | 

/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/System/Library/Frameworks/Foundation.framework/Modules/Foundation.swiftmodule/arm64e-apple-macos.swiftinterface:5:8: error: failed to build module 'CoreFoundation'; this SDK is not supported by the compiler (the SDK is built with 'Apple Swift version 6.0 effective-5.10 (swiftlang-6.0.0.7.43 clang-1600.0.25.3)', while this compiler is 'Apple Swift version 6.0.2 effective-5.10 (swiftlang-6.0.2.1.2 clang-1600.0.26.4)'). Please select a toolchain which matches the SDK.
    3 | // swift-module-flags: -target arm64e-apple-macos15.1 -target-variant arm64e-apple-ios18.1-macabi -enable-objc-interop -autolink-force-load -enable-library-evolution -module-link-name swiftFoundation -swift-version 5 -enforce-exclusivity=unchecked -O -library-level api -enable-upcoming-feature InferSendableFromCaptures -enable-bare-slash-regex -user-module-version 3107 -module-name Foundation -package-name "\"FoundationPreview\""
    4 | import Combine
    5 | import CoreFoundation
      |        `- error: failed to build module 'CoreFoundation'; this SDK is not supported by the compiler (the SDK is built with 'Apple Swift version 6.0 effective-5.10 (swiftlang-6.0.0.7.43 clang-1600.0.25.3)', while this compiler is 'Apple Swift version 6.0.2 effective-5.10 (swiftlang-6.0.2.1.2 clang-1600.0.26.4)'). Please select a toolchain which matches the SDK.
    6 | import Darwin
    7 | import Dispatch

/Library/Developer/CommandLineTools/usr/include/swift/module.modulemap: 0:
/Library/Developer/CommandLineTools/usr/include/swift/bridging.modulemap: 0:
/opt/homebrew/Library/Homebrew/cask/utils/copy-xattrs.swift:3:8: error: failed to build module 'Foundation'; this SDK is not supported by the compiler (the SDK is built with 'Apple Swift version 6.0 effective-5.10 (swiftlang-6.0.0.7.43 clang-1600.0.25.3)', while this compiler is 'Apple Swift version 6.0.2 effective-5.10 (swiftlang-6.0.2.1.2 clang-1600.0.26.4)'). Please select a toolchain which matches the SDK.
 1 | #!/usr/bin/swift
 2 | 
 3 | import Foundation
   |        `- error: failed to build module 'Foundation'; this SDK is not supported by the compiler (the SDK is built with 'Apple Swift version 6.0 effective-5.10 (swiftlang-6.0.0.7.43 clang-1600.0.25.3)', while this compiler is 'Apple Swift version 6.0.2 effective-5.10 (swiftlang-6.0.2.1.2 clang-1600.0.26.4)'). Please select a toolchain which matches the SDK.
 4 | 
 5 | struct SwiftErr: TextOutputStream {

Relevant casks

zotero@beta

[p-linnane]

Duplicate of https://github.com/orgs/Homebrew/discussions/5723.