Skip to content

Latest commit

 

History

History
30 lines (16 loc) · 1.1 KB

gallery_freesurfer_filled.rst

File metadata and controls

30 lines (16 loc) · 1.1 KB

Gallery - Freesurfer (labels filled)

Freesufer's cortical parcellation against the original MRI (note one axis is zoomed-in):

vis/fs_filled/cortical_zoomed_in.png

In the second screenshot, we show the use case for a single label (subcortical segmentation, tissue class or cortical ROI) - shown here is hippocampus:

vis/fs_filled/hippocampus_not_zoomed_in.png

Focusing on multiple subcortical structures:

vis/fs_filled/subcortical_multiple.png

And you can add as many ROIs as you like:

vis/fs_filled/subcortical_even_more.png

ROIs could be from anywhere in the MRI (including big cortical labels too!). For example, let's look at posterior cingulate (label 1023 in Freesurfer ColorLUT) in the left hemi-sphere :

vis/fs_filled/lh-posteriorcingulate_1023.png

And, how about insula?

vis/fs_filled/insula_1035.png

You can also combine as many cortical ROIs as you wish and zoom in on them to get every detail you need to judge their accuracy:

vis/fs_filled/single_label_cortical_zoomed_in.png