diff --git a/Dockerfile b/Dockerfile index 6f8aa72..26d4402 100644 --- a/Dockerfile +++ b/Dockerfile @@ -25,11 +25,11 @@ RUN Rscript -e "BiocManager::install(c('RCurl', 'xcms', 'MsExperiment', 'Summari ## Install the current package with vignettes RUN Rscript -e "devtools::install('.', dependencies = TRUE, type = 'source', build_vignettes = FALSE)" -USER rstudio +## USER rstudio ## build article for end-to-end:test -RUN Rscript -e "quarto::quarto_render('vignettes/a-end-to-end-untargeted-metabolomics.qmd', quiet = FALSE)" +##RUN Rscript -e "quarto::quarto_render('vignettes/a-end-to-end-untargeted-metabolomics.qmd', quiet = FALSE)" -USER root +##USER root -RUN find vignettes/ -name "*.html" -type f -delete && find vignettes/ -name "*_files" -type d -exec rm -r {} + +##RUN find vignettes/ -name "*.html" -type f -delete && find vignettes/ -name "*_files" -type d -exec rm -r {} +