pass parameters correctly in unit tests

Author: bkatiemills

tests/EN_background_available_check_validation.py

@@ -9,6 +9,7 @@
 class TestClass:
 
     parameters = {
+        'db': 'iquod.db',
         "table": 'unit'
     }
     qctests.EN_background_check.loadParameters(parameters)

tests/EN_background_check_validation.py

@@ -9,6 +9,7 @@
 class TestClass:
 
     parameters = {
+        'db': 'iquod.db',
         "table": 'unit'
     }
     qctests.EN_background_check.loadParameters(parameters)

tests/EN_constant_value_check_validation.py

@@ -9,6 +9,7 @@
 class TestClass:
 
     parameters = {
+        'db': 'iquod.db',
         "table": 'unit'
     }
 
@@ -53,4 +54,4 @@ def test_EN_constant_value_missing_depth(self):
         p = util.testingProfile.fakeProfile([0,0,0,0,0,0,0,0,0,0], [100,200,300,400,500,600,700,800,900,None], uid=8888)
         qc = qctests.EN_constant_value_check.test(p, self.parameters)
         truth = numpy.ones(10, dtype=bool)
-        assert numpy.array_equal(qc, truth), 'failing to flag when the deepest depth in a run of constant temperature is missing.'
+        assert numpy.array_equal(qc, truth), 'failing to flag when the deepest depth in a run of constant temperature is missing.'

tests/EN_increasing_depth_check_validation.py

@@ -8,6 +8,7 @@
 class TestClass:
 
     parameters = {
+        'db': 'iquod.db',
         "table": 'unit'
     }
 

tests/EN_spike_and_step_check_validation.py

@@ -8,6 +8,7 @@
 class TestClass:
 
     parameters = {
+        'db': 'iquod.db',
         "table": 'unit'
     }
 

tests/EN_stability_check_validation.py

@@ -9,6 +9,7 @@
 class TestClass:
 
     parameters = {
+        'db': 'iquod.db',
         "table": 'unit'
     }
 

tests/ICDC_aqc_01_level_order_validation.py

@@ -9,7 +9,10 @@
 
 class TestClass:
 
-    parameters = {}
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
 
     def setUp(self):
         # refresh this table every test
@@ -25,18 +28,18 @@ def test_ICDC_level_order_simple(self):
                                             [2.0, -1.0, 1.0],
                                             uid=8888)
         qc              = ICDC.test(p, self.parameters)
-        nlevels, zr, tr = ICDC.reordered_data(p)
-        zreverted       = ICDC.revert_order(p, zr)    
-        zreverted_truth = np.ma.array([2.0, -1.0, 1.0], 
+        nlevels, zr, tr = ICDC.reordered_data(p, self.parameters)
+        zreverted       = ICDC.revert_order(p, zr, self.parameters)
+        zreverted_truth = np.ma.array([2.0, -1.0, 1.0],
                                       mask = [False, True, False])
-        
+
         assert np.array_equal(qc, [False, True, False]), 'QC error'
         assert nlevels == 2, 'Subsetting of levels incorrect'
         assert np.array_equal(zr, [1.0, 2.0]), 'Depth reorder failed'
         assert np.array_equal(tr, [3.0, 1.0]), 'Temperature reorder failed'
-        assert np.array_equal(zreverted.data[zreverted.mask == False],                       
+        assert np.array_equal(zreverted.data[zreverted.mask == False],
                               zreverted_truth.data[zreverted_truth.mask == False]),           'Revert data failed'
-        assert np.array_equal(zreverted.mask,                       
+        assert np.array_equal(zreverted.mask,
                               zreverted_truth.mask), 'Revert data failed'
 
     def test_ICDC_level_order(self):
@@ -64,7 +67,7 @@ def test_ICDC_level_order(self):
             assert np.array_equal(qc, qctruth), 'Example {} QC wrong'.format(i + 1)
 
             # Check that the reordering is correct.
-            nlevels, zr, tr = ICDC.reordered_data(p)
+            nlevels, zr, tr = ICDC.reordered_data(p, self.parameters)
             assert np.array_equal(zr, ztruth), 'Example {} zr wrong'.format(i + 1)
             assert np.array_equal(tr, ttruth), 'Example {} tr wrong'.format(i + 1)
 

tests/ICDC_aqc_02_crude_range_validation.py

@@ -10,7 +10,10 @@
 
 class TestClass:
 
-    parameters = {}
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
 
     def setUp(self):
         # refresh this table every test

tests/ICDC_aqc_04_max_obs_depth_validation.py

@@ -10,7 +10,10 @@
 
 class TestClass:
 
-    parameters = {}
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
 
     def setUp(self):
         # refresh this table every test

tests/ICDC_aqc_05_stuck_value_validation.py

@@ -10,7 +10,10 @@
 
 class TestClass:
 
-    parameters = {}
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
 
     def setUp(self):
         # refresh this table every test

tests/ICDC_aqc_06_n_temperature_extrema_validation.py

@@ -9,7 +9,10 @@
 ##### --------------------------------------------------
 class TestClass:
 
-    parameters = {}
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
 
     def setUp(self):
         # refresh this table every test

tests/ICDC_aqc_07_spike_check_validation.py

@@ -9,7 +9,10 @@
 ##### --------------------------------------------------
 class TestClass:
 
-    parameters = {}
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
 
     def setUp(self):
         # refresh this table every test

tests/ICDC_aqc_08_gradient_check_validation.py

@@ -9,7 +9,10 @@
 ##### --------------------------------------------------
 class TestClass:
 
-    parameters = {}
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
 
     def setUp(self):
         # refresh this table every test

tests/ICDC_aqc_09_local_climatology_check_validation.py

@@ -9,8 +9,11 @@
 ##### --------------------------------------------------
 class TestClass:
 
-    parameters = {}
-    
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
+
     def setUp(self):
         # refresh this table every test
         ICDC.loadParameters(self.parameters)
@@ -55,7 +58,7 @@ def test_ICDC_local_climatology_check(self):
                                                      date=[year,month,day,0],
                                                      uid=i)
 
-                nlevels, z, t = ICDC.reordered_data(p)
+                nlevels, z, t = ICDC.reordered_data(p, self.parameters)
                 lat           = p.latitude()
                 lon           = p.longitude()
                 tmin, tmax    = ICDC_lc.get_climatology_range(nlevels, 

tests/ICDC_aqc_10_local_climatology_check_validation.py

@@ -7,8 +7,11 @@
 ##### --------------------------------------------------
 class TestClass():
 
-    parameters = {}
-    
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
+
     def setUp(self):
         # refresh this table every test
         ICDC.loadParameters(self.parameters)

tests/WOD_range_check_validation.py

@@ -10,7 +10,11 @@ def test_WOD_range_check_spotcheck():
     spot check the WOD_range_test
     '''
 
-    parameters = {}
+    parameters = {
+        'db': 'iquod.db',
+        'table': 'unit'
+    }
+
     qctests.WOD_range_check.loadParameters(parameters)
 
     # should just barely pass; temperatures at threshold for these depths
@@ -24,4 +28,4 @@ def test_WOD_range_check_spotcheck():
     qc = qctests.WOD_range_check.test(p, parameters)
     truth = numpy.zeros(2, dtype=bool)
     truth[1] = True 
-    assert numpy.array_equal(qc, truth), 'failed to flag deep warm temperatures in antarctic' 
+    assert numpy.array_equal(qc, truth), 'failed to flag deep warm temperatures in antarctic'