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Nice picture to illustrate a tree sequence on the front page #4

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benjeffery opened this issue Jan 14, 2021 · 8 comments
Open

Nice picture to illustrate a tree sequence on the front page #4

benjeffery opened this issue Jan 14, 2021 · 8 comments
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@benjeffery
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High-level overview of tree-sequences, with some helpful graphics/animations.

@benjeffery benjeffery added this to the Public release milestone Jan 14, 2021
@hyanwong
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hyanwong commented Jan 16, 2021

You can assign me to this @benjeffery . Also, I wonder if on the front page, we should have an interactive (webgl) component to represent the TS on the top left? A bit like a simpler version of this, but with fewer haplotypes (say 4 or 5, rather than the 8 below) and with the "ribbons" at the bottom in a pale colour with As, Ts, Gs, and Cs, to give a hint to the geneticists.

3D ts

That way we get a nice static looking picture, but the fact that you can rotate it makes the front page a bit snazzier. Something like the top left graphic at https://web.chemdoodle.com

It can't be beyond our powers to make something like that, and it works fine on my mobile.

@benjeffery
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Sounds great - I've done webgl before. We should have a static fallback for non-compat browsers.

@hyanwong
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hyanwong commented Jan 20, 2021

Do we want animations like the attached D3.js HTML in the intro, or is that a bit distracting? Perhaps it would be OK if e.g. they started on mouseover, but that's more problematic for mobile.

SPR.html.zip

@benjeffery
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I'm happy with auto-playing, looping animations. They will be missed and not played otherwise.

@hyanwong
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I just saw a site that used SVG animation-on-scroll quite effectively. That seems like a nice compromise between distracting eye-candy and something useful.

The site was (I realised later) a bit of a promotional ad, but here it is: https://equinor.ft.com/articles/building-worlds-largest-offshore-windfarm-in-uk (wind turbines move as you scroll!)

@hyanwong
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hyanwong commented Dec 7, 2021

High level overview is now in the tutorials and appropriately linked, so maybe change the name of this issue to "Nice picture to illustrate a tree sequence on the front page"

@benjeffery benjeffery changed the title Intro to tree sequences Nice picture to illustrate a tree sequence on the front page Dec 8, 2021
@hyanwong
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hyanwong commented Jul 6, 2022

@astheeggeggs suggested we could use something like the animation at the bottom of the viz tutorial: https://tskit.dev/tutorials/viz.html#animation

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hyanwong commented Jul 6, 2022

There's also this sort of thing - perhaps we could imagine a variant matrix being read out as trees?

Mutations.mov

@benjeffery benjeffery removed this from the Redesign milestone Sep 26, 2022
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