From e42bc6ec6996049992b98c183c3557fba9242a1f Mon Sep 17 00:00:00 2001 From: Vitaly Voloshin Date: Wed, 28 Aug 2024 14:29:57 +0100 Subject: [PATCH] Fixing some typos and unclear points in tutorials --- current-year/docs/ssh.md | 2 +- current-year/practicals/population_genetics/pt-4-map-call.md | 4 ++-- current-year/practicals/population_genetics/pt-5-popgen.md | 4 ++-- 3 files changed, 5 insertions(+), 5 deletions(-) diff --git a/current-year/docs/ssh.md b/current-year/docs/ssh.md index 60408a4..e1584a8 100644 --- a/current-year/docs/ssh.md +++ b/current-year/docs/ssh.md @@ -34,7 +34,7 @@ ssh bt007@bt007.genomicscourse.com ``` 4) The first time you log in, you will see a message talking about the host's - authenticity, it's fingerprint and asksing if you wish to continue. + authenticity, it's fingerprint and asking if you wish to continue. ``` The authenticity of host 'bt007.genomicscourse.com (192.135.232.24)' can't be established. diff --git a/current-year/practicals/population_genetics/pt-4-map-call.md b/current-year/practicals/population_genetics/pt-4-map-call.md index f5052fb..c493307 100644 --- a/current-year/practicals/population_genetics/pt-4-map-call.md +++ b/current-year/practicals/population_genetics/pt-4-map-call.md @@ -67,8 +67,8 @@ Create a symlink (using `ln -s`) from the reference genome ```bash 2023-10-02-mapping/ ├── input -│   ├── -> /shared/data/popgen/reference.fa -│   └── -> /shared/data/popgen/reads +│   ├── reads -> /shared/data/popgen/reads +│   └── reference.fa -> /shared/data/popgen/reference.fa ├── results ├── tmp └── WHATIDID.txt diff --git a/current-year/practicals/population_genetics/pt-5-popgen.md b/current-year/practicals/population_genetics/pt-5-popgen.md index b0f1fad..99b3259 100644 --- a/current-year/practicals/population_genetics/pt-5-popgen.md +++ b/current-year/practicals/population_genetics/pt-5-popgen.md @@ -49,8 +49,8 @@ The output of the `tree` command should look like this: ```bash 2023-10-xx-population_genetics ├── input -│   ├── snp.vcf.gz -│   └── snp.vcf.gz.tbi +│   ├── snp.vcf.gz -> /home/alice/2024-08-01-genotyping/results/snp.vcf.gz +│   └── snp.vcf.gz.tbi -> /home/alice/2024-08-01-genotyping/results/snp.vcf.gz.tbi └── popgen.Rmd ```